RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 ASPHD1Q5U4P2 390 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 SSX7Q7RTT5 188 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 PIFOQ8TCI5 191 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 PBDC1Q9BVG4 233 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 TREM1Q9NP99 234 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 SLC39A9Q9NUM3 307 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 APCP25054 2843 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 ABCA1O95477 2261 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 IGKV1OR2-108A0A075B7D4 117 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 IGHV3-21A0A0B4J1V1 117 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 A6NDX4 124 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 SH2D7A6NKC9 451 aaPredicted RBP6.56□□□□□ -1.36
COPS4-201ENST00000264389 ZFP92A6NM28 416 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 YIF1AO95070 293 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 FSHBP01225 129 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 CRYGCP07315 174 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 FGF8P55075 233 aaPredicted RBP6.56□□□□□ -1.36
COPS4-201ENST00000264389 GUK1Q16774 197 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 DEFB112Q30KQ8 113 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 UNQ5815/PRO19632Q6UWF5 114 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 CYP2G1PQ6ZSU1 146 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 RPP25LQ8N5L8 163 aaKnown RBP6.56□□□□□ -1.36
COPS4-201ENST00000264389 TTC9CQ8N5M4 171 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 BPIFCQ8NFQ6 507 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 SGMS2Q8NHU3 365 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 MBD3L1Q8WWY6 194 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 LINC00052Q96N35 136 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 EIF5A2Q9GZV4 153 aaKnown RBP6.56□□□□□ -1.36
COPS4-201ENST00000264389 DMRT1Q9Y5R6 373 aa6.56□□□□□ -1.36
COPS4-201ENST00000264389 NBPF19A0A087WUL8 3843 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 CENPEQ02224 2701 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 ASH1LQ9NR48 2969 aaKnown RBP6.55□□□□□ -1.36
COPS4-201ENST00000264389 IGLV11-55A0A075B6I3 123 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 A0A1W2PPV4 95 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 TCRBV4S1A1TA0A5B7 111 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 I3L2K1 104 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 M0QZK8 103 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 IFNA1P01562 189 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 GCSAMLQ5JQS6 135 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 C9orf152Q5JTZ5 239 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 C16orf82Q7Z2V1 217 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 BCL6BQ8N143 479 aaPredicted RBP6.55□□□□□ -1.36
COPS4-201ENST00000264389 CIARTQ8N365 385 aaPredicted RBP6.55□□□□□ -1.36
COPS4-201ENST00000264389 THAP8Q8NA92 274 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 THYN1Q9P016 225 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
COPS4-201ENST00000264389 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
COPS4-201ENST00000264389 SEC14L6B5MCN3 397 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 HMGB3O15347 200 aaKnown RBP6.54□□□□□ -1.36
COPS4-201ENST00000264389 EIF3GO75821 320 aaKnown RBP eCLIP6.54□□□□□ -1.36
COPS4-201ENST00000264389 RHOBP62745 196 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 CCL20P78556 96 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
COPS4-201ENST00000264389 PEA15Q15121 130 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 C9orf139Q6ZV77 190 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 IQCF2Q8IXL9 164 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 TEX29Q8N6K0 151 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 TMEM116Q8NCL8 245 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 FAM110DQ8TAY7 271 aaPredicted RBP6.54□□□□□ -1.36
COPS4-201ENST00000264389 RAB24Q969Q5 203 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 TMEM68Q96MH6 324 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 TNFRSF19Q9NS68 423 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 CREBBPQ92793 2442 aa6.54□□□□□ -1.36
COPS4-201ENST00000264389 GCN1Q92616 2671 aaKnown RBP6.54□□□□□ -1.36
COPS4-201ENST00000264389 IGKV1D-37A0A075B6S9 117 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 RBFOX3A6NFN3 312 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 K7EIM0 57 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 CD5P06127 495 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 LINC00869P0C866 280 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
COPS4-201ENST00000264389 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
COPS4-201ENST00000264389 GATA2P23769 480 aaPredicted RBP6.53□□□□□ -1.36
COPS4-201ENST00000264389 SELENOTP62341 195 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 HAGHQ16775 308 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 OR5T1Q8NG75 326 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 OR4X1Q8NH49 305 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 OR5R1Q8NH85 324 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 TRGV9Q99603 122 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 GNG13Q9P2W3 67 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 CSPG4Q6UVK1 2322 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 TMEM218A2RU14 115 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 LCE2BO14633 110 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 OR2J3O76001 311 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 IGHV4-59P01825 116 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 AMY1AP04745 511 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 SFTA3P0C7M3 94 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 BCL2P10415 239 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 PPT1P50897 306 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 ZNF90Q03938 601 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 FAM78BQ5VT40 261 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 SPNS3Q6ZMD2 512 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
COPS4-201ENST00000264389 OR1L4Q8NGR5 311 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms