RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 NAPSAO96009 420 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.6□□□□□ -0.39
NID1-201ENST00000264187 TMEM170AQ8WVE7 144 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 CACNG8Q8WXS5 425 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 MYOD1P15172 320 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 ATP5L2Q7Z4Y8 100 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 ABHD17AQ96GS6 310 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 TCRBV4S1A1TA0A5B7 111 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 CCL20P78556 96 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 CTHRC1Q96CG8 243 aa12.6□□□□□ -0.39
NID1-201ENST00000264187 A0A087WX48 190 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
NID1-201ENST00000264187 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 TM2D1Q9BX74 207 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 CHCHD2Q9Y6H1 151 aaPredicted RBP12.59□□□□□ -0.39
NID1-201ENST00000264187 UPK2O00526 184 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 TMEM144Q7Z5S9 345 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
NID1-201ENST00000264187 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
NID1-201ENST00000264187 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 A0A087WWC5 75 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
NID1-201ENST00000264187 AKAP11Q9UKA4 1901 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 SMIM10L1P0DMW3 83 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 SMIM10Q96HG1 83 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 NRXN3Q9Y4C0 1643 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 C17orf100A8MU93 164 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 ORMDL2Q53FV1 153 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.4
NID1-201ENST00000264187 ZNF124Q15973 351 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 ZNF474Q6S9Z5 364 aaPredicted RBP12.57□□□□□ -0.4
NID1-201ENST00000264187 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 OR10W1Q8NGF6 305 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 ASCL4Q6XD76 172 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 TDRD6O60522 2096 aaKnown RBP12.57□□□□□ -0.4
NID1-201ENST00000264187 FAM57AQ8TBR7 257 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 EPOPA6NHQ4 379 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 A8MXK9 166 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
NID1-201ENST00000264187 SSC4DQ8WTU2 575 aa12.57□□□□□ -0.4
NID1-201ENST00000264187 PIKFYVEQ9Y2I7 2098 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 ERVK11-1P61568 191 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
NID1-201ENST00000264187 CACNA1IQ9P0X4 2223 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 TRAV9-1A0A075B6T8 112 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 DUSP14O95147 198 aaKnown RBP12.56□□□□□ -0.4
NID1-201ENST00000264187 TNFRSF6BO95407 300 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 ZFAND6Q6FIF0 208 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
NID1-201ENST00000264187 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BKO60814 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BJP06899 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BOP23527 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BBP33778 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BDP58876 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BCP62807 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST2H2BEQ16778 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
NID1-201ENST00000264187 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
NID1-201ENST00000264187 OR9G9P0C7N8 305 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 SAP30O75446 220 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 CEACAM1P13688 526 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 TRAV40A0A0B4J280 105 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 J3QW42 95 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 TIMM23O14925 209 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
NID1-201ENST00000264187 TJP1Q07157 1748 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 RPL35AP18077 110 aaKnown RBP12.55□□□□□ -0.4
NID1-201ENST00000264187 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 TRGV11A0A075B6L2 103 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 A0A087WV48 116 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 C18orf12Q96KH6 178 aa12.55□□□□□ -0.4
NID1-201ENST00000264187 TCRAP04437 139 aa12.54□□□□□ -0.4
NID1-201ENST00000264187 EFNB3Q15768 340 aa12.54□□□□□ -0.4
NID1-201ENST00000264187 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
NID1-201ENST00000264187 FAM181AQ8N9Y4 354 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms