RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 ADIRFQ15847 76 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 PVRIGQ6DKI7 326 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 C3orf56Q8N813 242 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 PSMG3Q9BT73 122 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 CLN5O75503 358 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 IL6RP08887 468 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 AREGP15514 252 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 GUK1Q16774 197 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 FAM110DQ8TAY7 271 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 CYYR1Q96J86 154 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 C16orf92Q96LL3 132 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 SMIM7Q9BQ49 75 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 UFC1Q9Y3C8 167 aa6.64□□□□□ -1.35
GTF3C3-201ENST00000263956 TRAV14DV4A0A0A6YYC5 116 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 A0A1W2PPI3 338 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 H0YIZ8 118 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 FCN1O00602 326 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 SNAPINO95295 136 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 ZNF137PP52743 207 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 CLLU1Q5K131 121 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 CHRDL1Q9BU40 450 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 MRPL32Q9BYC8 188 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 TMEM14BQ9NUH8 114 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 KRBOX1C9JBD0 128 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 TNFRSF13BO14836 293 aaPredicted RBP6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 ZNF207O43670 478 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 GGCTO75223 188 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 HIST1H1EP10412 219 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 RAB4BP61018 213 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 SPSB3Q6PJ21 355 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 C12orf54Q6X4T0 127 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 IGKV1-39P01597 117 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 TCF23Q7RTU1 214 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 PIP4P2Q8N4L2 257 aa6.63□□□□□ -1.35
GTF3C3-201ENST00000263956 IGHV3OR16-13A0A075B7E8 117 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 TRBV7-1A0A0A6YYK4 115 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 IGHV3-74A0A0B4J1X5 117 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 MT-ND4LP03901 98 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 SVBPQ8N300 66 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 TMEM208Q9BTX3 173 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 NDUFA4L2Q9NRX3 87 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 SRRM4A7MD48 611 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 SULT1A2P50226 295 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 RANP62826 216 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 AANATQ16613 207 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 EBLN2Q6P2I7 272 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 SGMS2Q8NHU3 365 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 CHD3Q12873 2000 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 IGHV3-49A0A0A0MS15 119 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 XKRY2A2RUG3 117 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 RAB24Q969Q5 203 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 NAV3Q8IVL0 2385 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 IGHV3OR16-8A0A075B7F1 116 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 G3V318 75 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 KIAA0141Q14154 515 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 KCNIP4Q6PIL6 250 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 TMEM14EPQ6UXP3 125 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 SLC7A5P1Q8MH63 180 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 OR51M1Q9H341 326 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 TPSG1Q9NRR2 321 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 WDR83OSQ9Y284 106 aa6.62□□□□□ -1.35
GTF3C3-201ENST00000263956 COL6A3P12111 3177 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 ARFGEF3Q5TH69 2177 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 RNF222A6NCQ9 220 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 PAGE4O60829 102 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 S100A6P06703 90 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 LINC00305Q7Z4B0 112 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 C11orf94C9JXX5 98 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 PRR27Q6MZM9 219 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 RNF125Q96EQ8 232 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 TPPP3Q9BW30 176 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 VAX2Q9UIW0 290 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 RBFOX3A6NFN3 312 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 TMEM86BQ8N661 226 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 NPBQ8NG41 125 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 IGFBPL1Q8WX77 278 aa6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 NOL4LQ96MY1 436 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-201ENST00000263956 ODF3BA8MYP8 253 aa6.6□□□□□ -1.35
GTF3C3-201ENST00000263956 ELANEP08246 267 aa6.6□□□□□ -1.35
GTF3C3-201ENST00000263956 GATA2P23769 480 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-201ENST00000263956 RPL29P47914 159 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-201ENST00000263956 SNRPD3P62318 126 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-201ENST00000263956 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms