RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TMEM183BQ1AE95 376 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 CYB5R2Q6BCY4 276 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 SLC35E3Q7Z769 313 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 FOXC2Q99958 501 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 BCL2P10415 239 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 SSTR5P35346 364 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 IL36RNQ9UBH0 155 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 NAT8Q9UHE5 227 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF407Q9C0G0 2248 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 PDE6DO43924 150 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 EFNA4P52798 201 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 ELOBQ15370 118 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 S4R3C0 116 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 PRSS22Q9GZN4 317 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 RBFOX3A6NFN3 312 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 C1QTNF9BB2RNN3 333 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 DAZAP2Q15038 168 aaPredicted RBP6.81□□□□□ -1.32
PTPN3-201ENST00000262539 Q5BKY6 102 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM144Q7Z5S9 345 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM133Q9H2Q1 129 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 KLK15Q9H2R5 256 aa6.81□□□□□ -1.32
PTPN3-201ENST00000262539 PAGE4O60829 102 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1D-33P01593 117 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1-33P01594 117 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 COX6CP09669 75 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 OR10J1P30954 320 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 PRCDQ00LT1 54 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ROS1P08922 2347 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1-6A0A0C4DH72 117 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 A6NJY4 79 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 LHBP01229 141 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CKS2P33552 79 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 BEND2Q8NDZ0 799 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1D-17A0A075B6S4 117 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 A0A0G2JLM5 398 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 SAP30O75446 220 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CGB3P0DN86 165 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CGB7P0DN87 165 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 GNLYP22749 145 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 RNASE4P34096 147 aaKnown RBP6.8□□□□□ -1.32
PTPN3-201ENST00000262539 C2orf83Q53S99 150 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 LDLRAD2Q5SZI1 272 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CREBBPQ92793 2442 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF503-AS2A6NEH8 195 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 C15orf61A6NNL5 157 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 UPK2O00526 184 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 IGHV3-11P01762 117 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 LINC00869P0C866 280 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 SEM1Q6ZVN7 128 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 C11orf53Q8IXP5 236 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ANAPC16Q96DE5 110 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CD99P14209 185 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 PPP1R27Q86WC6 154 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF525Q8N782 197 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
PTPN3-201ENST00000262539 FOXA2Q9Y261 457 aaPredicted RBP6.8□□□□□ -1.32
PTPN3-201ENST00000262539 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
PTPN3-201ENST00000262539 PGPA6NDG6 321 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 LILRA1O75019 489 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 C2orf68Q2NKX9 166 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 CRIP3Q6Q6R5 217 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF253O75346 499 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 BPIFA4PQ86YQ2 179 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 IER3P46695 156 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 CLEC19AQ6UXS0 136 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 OR9G4Q8NGQ1 327 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 C2orf88Q9BSF0 95 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 M0QZK8 103 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 MEF2BQ02080 365 aaPredicted RBP6.79□□□□□ -1.32
PTPN3-201ENST00000262539 CD177Q8N6Q3 437 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 PGLYRP4Q96LB8 373 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 QTRT1Q9BXR0 403 aaKnown RBP6.79□□□□□ -1.32
PTPN3-201ENST00000262539 ZFP30Q9Y2G7 519 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 MSGN1A6NI15 193 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 EGR1P18146 543 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 WDR86Q86TI4 376 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 GAFA1Q96PS6 74 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 A0A087X0M5 115 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 A0A1B0GX30 115 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 AMY1AP04745 511 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
PTPN3-201ENST00000262539 PXMP4Q9Y6I8 212 aa6.79□□□□□ -1.32
PTPN3-201ENST00000262539 H3BTX0 84 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 DTX2Q86UW9 622 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 ATP6V0BQ99437 205 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF430Q9H8G1 570 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-201ENST00000262539 AURKAIP1Q9NWT8 199 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-201ENST00000262539 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-201ENST00000262539 C15orf65H3BRN8 121 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 PRTN3P24158 256 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 FAM216BQ8N7L0 139 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 IFI27L2Q9H2X8 130 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms