RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.96
SLC6A4-201ENST00000261707 CD55P08174 381 aa9.02□□□□□ -0.96
SLC6A4-201ENST00000261707 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.96
SLC6A4-201ENST00000261707 A0A1W2PQF6 199 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 CFHR5Q9BXR6 569 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 NHSQ6T4R5 1651 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 A0A1B0GWJ7 208 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 MLNRO43193 412 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 FDCSPQ8NFU4 85 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 TMEM54Q969K7 222 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 SYS1-DBNDD2H3BUS1 97 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 SPINT1O43278 529 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 CD300EQ496F6 205 aaPredicted RBP9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 SIGLEC12Q96PQ1 595 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 C20orf144Q9BQM9 153 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 TMEM30BQ3MIR4 351 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 AGMATQ9BSE5 352 aa9.02□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3-66A0A0C4DH42 116 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 PPBPP02775 128 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 KLF17Q5JT82 389 aaPredicted RBP9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 C4orf51C9J302 202 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 SLC25A20O43772 301 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 GHRHP01286 108 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 MST1P26927 711 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 SP5Q6BEB4 398 aaPredicted RBP9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 RTN4RL2Q86UN3 420 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 FOXA2Q9Y261 457 aaPredicted RBP9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
SLC6A4-201ENST00000261707 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
SLC6A4-201ENST00000261707 CD69Q07108 199 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 LINC01559Q495D7 138 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 LINC01551Q86U37 167 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 FAM110DQ8TAY7 271 aaPredicted RBP9□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV1-45A0A0A0MS14 117 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 IFI6P09912 130 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
SLC6A4-201ENST00000261707 CACNG8Q8WXS5 425 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 C12orf77C9JDV5 145 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 TMEM238C9JI98 176 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 OR9G1Q8NH87 305 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 MRAPQ8TCY5 172 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 MRPL27Q9P0M9 148 aaKnown RBP9□□□□□ -0.97
SLC6A4-201ENST00000261707 ARAP2Q8WZ64 1704 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3-35A0A0C4DH35 117 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 LAGE3Q14657 143 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 PILRAQ9UKJ1 303 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 PRR32B1ATL7 298 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 EFNB3Q15768 340 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
SLC6A4-201ENST00000261707 RNASE6Q93091 150 aaKnown RBP9□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 PYYP10082 97 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 PRR31Q5SQ13 230 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 FABP5P3A8MUU1 101 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 NPC2P61916 151 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 KLF14Q8TD94 323 aaPredicted RBP8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 DOCK2Q92608 1830 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 OR9G9P0C7N8 305 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 IFITM1P13164 125 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 ID3Q02535 119 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 TAF1P21675 1872 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 PDE4DIPQ5VU43 2346 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 LILRA6Q6PI73 481 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 OSR1Q8TAX0 266 aaPredicted RBP8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 SCARF2Q96GP6 870 aaPredicted RBP8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 FOXL2P58012 376 aa8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
SLC6A4-201ENST00000261707 BTAF1O14981 1849 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 C9orf118A6NHY6 69 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 PAX1P15863 534 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 GFI1Q99684 422 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 CLEC7AQ9BXN2 247 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 SRXN1Q9BYN0 137 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 S4R3C0 116 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 SCN1AP35498 2009 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 TRBV6-7A0A0A0MS04 114 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 D6R8Y8 96 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 RPRMLQ8N4K4 120 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 TNRC6CQ9HCJ0 1690 aaKnown RBP8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 IGKV1D-13A0A0B4J2D9 117 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 K7EP13 123 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 IGKV1-13P0DP09 117 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 AZU1P20160 251 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 CSRP1P21291 193 aaKnown RBP8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 C9JAW5 83 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 FXYD7P58549 80 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 S100A7L2Q5SY68 101 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 ASCL2Q99929 193 aa8.98□□□□□ -0.97
SLC6A4-201ENST00000261707 DLEC1Q9Y238 1755 aa8.97□□□□□ -0.97
SLC6A4-201ENST00000261707 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms