RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OR11H2Q8NH07 326 aa15.72■□□□□ 0.11
PTPRE-201ENST00000254667 HINT1P49773 126 aaPredicted RBP15.71■□□□□ 0.11
PTPRE-201ENST00000254667 ALKBH7Q9BT30 221 aaPredicted RBP15.71■□□□□ 0.11
PTPRE-201ENST00000254667 IGKV1-27A0A075B6S5 117 aa15.71■□□□□ 0.11
PTPRE-201ENST00000254667 FOXA3P55318 350 aaPredicted RBP15.71■□□□□ 0.11
PTPRE-201ENST00000254667 LOC107984156A0A0G2JMH3 177 aa15.71■□□□□ 0.11
PTPRE-201ENST00000254667 FOXL2NBQ6ZUU3 175 aa15.71■□□□□ 0.11
PTPRE-201ENST00000254667 ARL17AQ8IVW1 177 aa15.71■□□□□ 0.11
PTPRE-201ENST00000254667 TRBV6-6A0A0A6YYG2 114 aa15.71■□□□□ 0.1
PTPRE-201ENST00000254667 IGHV1-8P0DP01 117 aa15.71■□□□□ 0.1
PTPRE-201ENST00000254667 GAGE10A6NGK3 116 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 LINC01587Q99440 93 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 A0A0G2JNJ9 132 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 K7ERU9 68 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 UQCRFS1P47985 274 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 Q9UFV3 132 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 CNOT1A5YKK6 2376 aaKnown RBP15.7■□□□□ 0.1
PTPRE-201ENST00000254667 NAPSAO96009 420 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 LEMD1Q68G75 181 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 TMEM167AQ8TBQ9 72 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 EPDR1Q9UM22 224 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 H0YIZ8 118 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 SUMO2P61956 95 aaKnown RBP15.7■□□□□ 0.1
PTPRE-201ENST00000254667 UNQ6494/PRO21346Q6UXR6 183 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 IGHV3OR16-8A0A075B7F1 116 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 TRAV40A0A0B4J280 105 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 RNASE4P34096 147 aaKnown RBP15.7■□□□□ 0.1
PTPRE-201ENST00000254667 ORMDL3Q8N138 153 aa15.7■□□□□ 0.1
PTPRE-201ENST00000254667 TMEM262E9PQX1 116 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 EP300Q09472 2414 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-201ENST00000254667 RLFQ13129 1914 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 TMEM200BQ69YZ2 307 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 ARHGEF17Q96PE2 2063 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-201ENST00000254667 OTX1P32242 354 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-201ENST00000254667 RPL23P62829 140 aaKnown RBP15.69■□□□□ 0.1
PTPRE-201ENST00000254667 H7C2G1 150 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 APOHP02749 345 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-201ENST00000254667 DDTP30046 118 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 C2orf88Q9BSF0 95 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 MSRB2Q9Y3D2 182 aa15.69■□□□□ 0.1
PTPRE-201ENST00000254667 CEP250Q9BV73 2442 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 DPRXA6NFQ7 191 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 LDLRAD2Q5SZI1 272 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 HEATR5BQ9P2D3 2071 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 M0R1W7 72 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 PSPNO60542 156 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 PLAURQ03405 335 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 CD24P25063 80 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 C8orf46Q8TAG6 207 aa15.68■□□□□ 0.1
PTPRE-201ENST00000254667 C1QTNF9BB2RNN3 333 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 CD177Q8N6Q3 437 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 OSTCQ9NRP0 149 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 PLXNA3P51805 1871 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 TRAV41A0A0B4J266 112 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 CD55P08174 381 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 EFNB3Q15768 340 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 MBD3L1Q8WWY6 194 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 PRB3Q04118 309 aaPredicted RBP15.67■□□□□ 0.1
PTPRE-201ENST00000254667 TPTE2P1Q5T6R2 138 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 TRAV21A0A0B4J279 112 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 PAX8Q06710 450 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 CYB5R2Q6BCY4 276 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 SCGB3A1Q96QR1 104 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 KLHDC3Q9BQ90 382 aa15.67■□□□□ 0.1
PTPRE-201ENST00000254667 B4DSR2 109 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 IGKV3OR2-268A0A0C4DH90 116 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 HIGD1CA8MV81 97 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 VMO1Q7Z5L0 202 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 DMRT1Q9Y5R6 373 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 A0A1W2PRX2 142 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 FGF16O43320 207 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 STHQ8IWL8 128 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 TMEM170BQ5T4T1 132 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 TMEM160Q9NX00 188 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 ZNF318Q5VUA4 2279 aa15.66■□□□□ 0.1
PTPRE-201ENST00000254667 H3BRM9 83 aa15.65■□□□□ 0.1
PTPRE-201ENST00000254667 SLC25A48Q6ZT89 311 aaKnown RBP15.65■□□□□ 0.1
PTPRE-201ENST00000254667 IGHV1-3A0A0C4DH29 117 aa15.65■□□□□ 0.1
PTPRE-201ENST00000254667 OVOL1O14753 267 aa15.65■□□□□ 0.1
PTPRE-201ENST00000254667 GNLYP22749 145 aa15.65■□□□□ 0.1
PTPRE-201ENST00000254667 PSG8Q9UQ74 426 aa15.65■□□□□ 0.1
PTPRE-201ENST00000254667 Q6ZS49 121 aa15.64■□□□□ 0.1
PTPRE-201ENST00000254667 TCF23Q7RTU1 214 aa15.64■□□□□ 0.1
PTPRE-201ENST00000254667 MBNL3Q9NUK0 354 aaKnown RBP15.64■□□□□ 0.1
PTPRE-201ENST00000254667 SOD3P08294 240 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 CACNG7P62955 275 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 TRGV2A0A075B6R0 118 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 PSMB11A5LHX3 300 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 SELLP14151 372 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 CMC4P56277 68 aaPredicted RBP15.64■□□□□ 0.09
PTPRE-201ENST00000254667 VWA8A3KMH1 1905 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 GNG5P63218 68 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 KIF26BQ2KJY2 2108 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 TREML4Q6UXN2 200 aa15.64■□□□□ 0.09
PTPRE-201ENST00000254667 TBL2Q9Y4P3 447 aaKnown RBP15.64■□□□□ 0.09
PTPRE-201ENST00000254667 PYYP10082 97 aa15.63■□□□□ 0.09
PTPRE-201ENST00000254667 GAFA1Q96PS6 74 aa15.63■□□□□ 0.09
PTPRE-201ENST00000254667 F11RQ9Y624 299 aaKnown RBP15.63■□□□□ 0.09
PTPRE-201ENST00000254667 FNDC1Q4ZHG4 1894 aaPredicted RBP15.63■□□□□ 0.09
PTPRE-201ENST00000254667 IMMP2LQ96T52 175 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms