RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
LSM8-201ENST00000249299 USMG5Q96IX5 58 aa10.14□□□□□ -0.79
LSM8-201ENST00000249299 SLC35E1Q96K37 410 aa10.14□□□□□ -0.79
LSM8-201ENST00000249299 CXorf58Q96LI9 332 aa10.14□□□□□ -0.79
LSM8-201ENST00000249299 TXN2Q99757 166 aa10.14□□□□□ -0.79
LSM8-201ENST00000249299 ZNF471Q9BX82 626 aaPredicted RBP10.14□□□□□ -0.79
LSM8-201ENST00000249299 C16orf95Q9H693 158 aa10.14□□□□□ -0.79
LSM8-201ENST00000249299 GAR1Q9NY12 217 aaKnown RBP10.14□□□□□ -0.79
LSM8-201ENST00000249299 I3L2K1 104 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 CLINT1Q14677 625 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 RPL7L1Q6DKI1 246 aaKnown RBP10.13□□□□□ -0.79
LSM8-201ENST00000249299 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 OR5T1Q8NG75 326 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 OR4X1Q8NH49 305 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 SCGB1C1Q8TD33 95 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 BSCL2Q96G97 398 aaPredicted RBP10.13□□□□□ -0.79
LSM8-201ENST00000249299 GINS3Q9BRX5 216 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 WDR61Q9GZS3 305 aaKnown RBP10.13□□□□□ -0.79
LSM8-201ENST00000249299 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 KCNIP2Q9NS61 270 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 TNFRSF19Q9NS68 423 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
LSM8-201ENST00000249299 TIMM9Q9Y5J7 89 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 DMRT1Q9Y5R6 373 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 TET2Q6N021 2002 aaPredicted RBP10.13□□□□□ -0.79
LSM8-201ENST00000249299 PLXNB1O43157 2135 aa10.13□□□□□ -0.79
LSM8-201ENST00000249299 MAST4O15021 2626 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 A0A0G2JLM5 398 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
LSM8-201ENST00000249299 G3V318 75 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 K7EIM0 57 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 MT-CO2P00403 227 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 ELANEP08246 267 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 SEC11BP0C7V7 166 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 APELAP0DMC3 54 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 NPBWR1P48145 328 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 GAMTQ14353 236 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 Q6ZS46 218 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 Q71RC1 249 aaPredicted RBP10.12□□□□□ -0.79
LSM8-201ENST00000249299 RNF152Q8N8N0 203 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 MISP3Q96FF7 219 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
LSM8-201ENST00000249299 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
LSM8-201ENST00000249299 FNDC4Q9H6D8 234 aaPredicted RBP10.12□□□□□ -0.79
LSM8-201ENST00000249299 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 LOC100996750A0A140TA64 210 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 IFNA7P01567 189 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 SELENOTP62341 195 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 SERF2P84101 59 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 FOXE3Q13461 319 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 TEX38Q6PEX7 206 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 Q6ZSV7 163 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 THAP8Q8NA92 274 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 TAF15Q92804 592 aaKnown RBP eCLIP10.11□□□□□ -0.79
LSM8-201ENST00000249299 KRTAP4-6Q9BYQ5 205 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 FBXL7Q9UJT9 491 aa10.11□□□□□ -0.79
LSM8-201ENST00000249299 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
LSM8-201ENST00000249299 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 C17orf112F2Z3M2 114 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 FABP1P07148 127 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 SPP1P10451 314 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 PSMB8P28062 276 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 MFAP4P55083 255 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 RHOGP84095 191 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 BTNL8Q6UX41 500 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 OR2G3Q8NGZ4 309 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 OR4F5Q8NH21 305 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 SCARB1Q8WTV0 552 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 NOL4LQ96MY1 436 aaPredicted RBP10.1□□□□□ -0.79
LSM8-201ENST00000249299 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 TRGV9Q99603 122 aa10.1□□□□□ -0.79
LSM8-201ENST00000249299 UBE2L5PA0A1B0GUS4 154 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 PSMB11A5LHX3 300 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 UMAD1C9J7I0 102 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 CLN5O75503 358 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 CFDP00746 253 aaPredicted RBP10.09□□□□□ -0.79
LSM8-201ENST00000249299 RPL29P47914 159 aaKnown RBP10.09□□□□□ -0.79
LSM8-201ENST00000249299 RAB5CP51148 216 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 AKR1C1Q04828 323 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 ATP5G2Q06055 141 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 ZNF767PQ75MW2 155 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 C21orf62Q9NYP8 219 aa10.09□□□□□ -0.79
LSM8-201ENST00000249299 SMCO3A2RU48 225 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 OR2J3O76001 311 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 NDUFB8O95169 186 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 MBP02144 154 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 FGF7P21781 194 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 RAB9AP51151 201 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 C15orf32Q32M92 178 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms