RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CT45A6P0DMU7 189 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CT45A5P0DMU8 189 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CT45A7P0DMV0 189 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CCKARP32238 428 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 FAM27E3Q08E93 113 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 EFNB3Q15768 340 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 FAM201AQ5SY85 155 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 OR1L8Q8NGR8 309 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 OR1P1Q8NH06 330 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 OR4A5Q8NH83 315 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 OR5R1Q8NH85 324 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
CXCR4-201ENST00000241393 UHRF2Q96PU4 802 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CCL13Q99616 98 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 TMEM167BQ9NRX6 74 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 TP53TG5Q9Y2B4 290 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 TANC2Q9HCD6 1990 aa6.34□□□□□ -1.39
CXCR4-201ENST00000241393 CNOT1A5YKK6 2376 aaKnown RBP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 MDFIC2A0A1B0GVS7 189 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 APOA2P02652 100 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 SRSF1Q07955 248 aaKnown RBP eCLIP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 LINC00311Q8N616 119 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 VSTM2AQ8TAG5 236 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 ZNF596Q8TC21 504 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 CACNG8Q8WXS5 425 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 LEAP2Q969E1 77 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 PACRGQ96M98 296 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 PCGF1Q9BSM1 259 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 GATCO43716 136 aaKnown RBP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 IGHV3-7P01780 117 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 LINC00869P0C866 280 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 DEFA4P12838 97 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 FABP4P15090 132 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 GPX4P36969 197 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 TDGF1P3P51864 188 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 UBE2G2P60604 165 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 ADIPOQQ15848 244 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 Q5PR19 223 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 GFI1BQ5VTD9 330 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 DUX4L9Q6RFH8 374 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-201ENST00000241393 PQLC2Q6ZP29 291 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 ASCL5Q7RTU5 278 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 NECAP1Q8NC96 275 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 DEFB108BQ8NET1 73 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 SSMEM1Q8WWF3 244 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 RNF2Q99496 336 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 FUT9Q9Y231 359 aa6.33□□□□□ -1.4
CXCR4-201ENST00000241393 SVILO95425 2214 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TET2Q6N021 2002 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TEX50A0A1B0GTY4 177 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 A0A1W2PN81 502 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 DPRXA6NFQ7 191 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 MMP23AO75900 390 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 OR4A8P0C604 315 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 OR5G3P0C626 314 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 USF1P22415 310 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 IL3RAP26951 378 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 CHRNA7P36544 502 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 GNG10P50151 68 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 ZNF137PP52743 207 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TAS2R45P59539 299 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 YPEL3P61236 119 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 RPL31P62899 125 aaKnown RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 UTF1Q5T230 341 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TEX38Q6PEX7 206 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 PDPNQ86YL7 162 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 DOLPP1Q86YN1 238 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 OR10G8Q8NGN5 311 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TMEM186Q96B77 213 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 ZNF714Q96N38 554 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 MRPL32Q9BYC8 188 aaKnown RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TECRQ9NZ01 308 aaKnown RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 KAAG1Q9UBP8 84 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 ZNF835Q9Y2P0 537 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 YTHDF2Q9Y5A9 579 aaKnown RBP6.32□□□□□ -1.4
CXCR4-201ENST00000241393 PLCE1Q9P212 2302 aa6.32□□□□□ -1.4
CXCR4-201ENST00000241393 TRBV20OR9-2A0A075B6H5 130 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 PPIAL4EA0A075B759 164 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 CBY3A6NI87 242 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 SRRM4A7MD48 611 aaKnown RBP6.31□□□□□ -1.4
CXCR4-201ENST00000241393 PPIAL4DF5H284 164 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 H0YJW9 148 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 TMEM178BH3BS89 294 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 K7EM74 188 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 TNFRSF13BO14836 293 aaPredicted RBP6.31□□□□□ -1.4
CXCR4-201ENST00000241393 GCGP01275 180 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 AMBPP02760 352 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 IGKV1-16P04430 117 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 SAA1P0DJI8 122 aaPredicted RBP6.31□□□□□ -1.4
CXCR4-201ENST00000241393 PPIAL4FP0DN26 164 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 RNASE2P10153 161 aaKnown RBP6.31□□□□□ -1.4
CXCR4-201ENST00000241393 NBL1P41271 181 aa6.31□□□□□ -1.4
CXCR4-201ENST00000241393 PKIAP61925 76 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms