RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MED12Q93074 2177 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 AMBPP02760 352 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 CD7P09564 240 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 PPP1R32Q7Z5V6 425 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
MSH6-201ENST00000234420 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 UMODP07911 640 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 CFHR1Q03591 330 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 FOXL1Q12952 345 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 Q96MF0 132 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 SCRT1Q9BWW7 348 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
MSH6-201ENST00000234420 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 CXCL10P02778 98 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 TSPAN7P41732 249 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 KIAA0040Q15053 153 aa9.4□□□□□ -0.9
MSH6-201ENST00000234420 J3QT63 122 aa9.4□□□□□ -0.91
MSH6-201ENST00000234420 CD300EQ496F6 205 aaPredicted RBP9.4□□□□□ -0.91
MSH6-201ENST00000234420 IFITM1P13164 125 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
MSH6-201ENST00000234420 KLHDC2Q9Y2U9 406 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 ARFGEF1Q9Y6D6 1849 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 GLRX5Q86SX6 157 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 LINC00596Q86U02 117 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 ZNRF1Q8ND25 227 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 OR13A1Q8NGR1 328 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 GTF3AQ92664 365 aaKnown RBP9.39□□□□□ -0.91
MSH6-201ENST00000234420 C9JAW5 83 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 ZNF708P17019 499 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 SPACA3Q8IXA5 215 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 OR2H2O95918 312 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 LSM6P62312 80 aaKnown RBP9.39□□□□□ -0.91
MSH6-201ENST00000234420 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 RALGAPA2Q2PPJ7 1873 aa9.39□□□□□ -0.91
MSH6-201ENST00000234420 MSGN1A6NI15 193 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 NAPSAO96009 420 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 SPANXA1Q9NS26 97 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 ITGB1BP1O14713 200 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 BCORQ6W2J9 1755 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 CD8AP01732 235 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 SLC22A18ASQ8N1D0 253 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 IDI2-AS1Q9NZ38 188 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 TET1Q8NFU7 2136 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 TICRRQ7Z2Z1 1910 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 CLDND2Q8NHS1 167 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 PDFQ9HBH1 243 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 MLNRO43193 412 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
MSH6-201ENST00000234420 GUSBP1Q15486 140 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 FAM166AQ6J272 317 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
MSH6-201ENST00000234420 B5MCH6 92 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 H7C1H1 209 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 C1QTNF9P0C862 333 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
MSH6-201ENST00000234420 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 MRPL32Q9BYC8 188 aaKnown RBP9.37□□□□□ -0.91
MSH6-201ENST00000234420 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 ASIPP42127 132 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 UCP1P25874 307 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 TFF3Q07654 80 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 PPP1R27Q86WC6 154 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 C1QL4Q86Z23 238 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 CA11O75493 328 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 NPSP0C0P6 89 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 LINC00158P58513 81 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 A0A1W2PQF6 199 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 NDUFS5O43920 106 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
MSH6-201ENST00000234420 LAMB2P55268 1798 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 GAGE12JA6NER3 117 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
MSH6-201ENST00000234420 ZP1P60852 638 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 GAGE1Q13065 139 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 GAGE4Q13068 117 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 GAGE5Q13069 117 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 GAGE6Q13070 117 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 LCN12Q6JVE5 192 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 TMEM167AQ8TBQ9 72 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 SP5Q6BEB4 398 aaPredicted RBP9.36□□□□□ -0.91
MSH6-201ENST00000234420 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 LRRK1Q38SD2 2015 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
MSH6-201ENST00000234420 CRYGNQ8WXF5 182 aa9.36□□□□□ -0.91
MSH6-201ENST00000234420 CEP290O15078 2479 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms