RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 PDE6DO43924 150 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 PDLIM4P50479 330 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 ATP5J2P56134 94 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 GNB1P62873 340 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 ZNF674Q2M3X9 581 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 RUSC1-AS1Q66K80 236 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 NPBQ8NG41 125 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 NANPQ8TBE9 248 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 TMEM37Q8WXS4 190 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 PERPQ96FX8 193 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 TXNDC17Q9BRA2 123 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 NDUFA3O95167 84 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 CTAG1AP78358 180 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 ELOBQ15370 118 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 C19orf35Q6ZS72 473 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 OR51G1Q8NGK1 321 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 OR1P1Q8NH06 330 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
ITGA4-201ENST00000233573 NPIPB3Q92617 1050 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 MALSU1Q96EH3 234 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 ZNF503Q96F45 646 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
ITGA4-201ENST00000233573 DMRT1Q9Y5R6 373 aa12.73□□□□□ -0.37
ITGA4-201ENST00000233573 RPL23P62829 140 aaKnown RBP12.72□□□□□ -0.37
ITGA4-201ENST00000233573 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
ITGA4-201ENST00000233573 TCRBV4S1A1TA0A5B7 111 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 F6UZH7 168 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 NBR2O15453 112 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 CLN5O75503 358 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 MOSP00540 346 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 IGHV3-48P01763 117 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 RND2P52198 227 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 LINC00518Q8N0U6 118 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 FAM168AQ92567 244 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
ITGA4-201ENST00000233573 LPAR2Q9HBW0 351 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 F11RQ9Y624 299 aaKnown RBP12.71□□□□□ -0.37
ITGA4-201ENST00000233573 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
ITGA4-201ENST00000233573 A0A1W2PRD5 423 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 A0A1W2PRF3 423 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 A0A1W2PRM7 423 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 APELAP0DMC3 54 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 PLA2G2AP14555 144 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 MMDQ15546 238 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 MINOS1Q5TGZ0 78 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 ETFRF1Q6IPR1 90 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 Q8WTZ3 238 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 MINOS1-NBL1R4GNA1 71 aa12.71□□□□□ -0.38
ITGA4-201ENST00000233573 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 OOSP1A8MZH6 123 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 MT-CO2P00403 227 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 KRTAP10-9P60411 292 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 ZNF90Q03938 601 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
ITGA4-201ENST00000233573 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
ITGA4-201ENST00000233573 TECRQ9NZ01 308 aaKnown RBP12.7□□□□□ -0.38
ITGA4-201ENST00000233573 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
ITGA4-201ENST00000233573 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CD24P25063 80 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 KIAA0141Q14154 515 aaPredicted RBP12.69□□□□□ -0.38
ITGA4-201ENST00000233573 SSX2Q16385 188 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 Q8N6K4 173 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 C10orf105Q8TEF2 133 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 MISP3Q96FF7 219 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 TBX15Q96SF7 602 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 SSX3Q99909 188 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CTDSP1Q9GZU7 261 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 DOK5Q9P104 306 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 IGHV4-30-2A0A087WSY4 118 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CORTO00230 105 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 NDUFB4O95168 129 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CXCL1P09341 107 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 EBI3Q14213 229 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 ADIRFQ15847 76 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 ZFP82Q8N141 532 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 DERL1Q9BUN8 251 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CSMD1Q96PZ7 3565 aa12.69□□□□□ -0.38
ITGA4-201ENST00000233573 CLDN34H7C241 214 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 LGALS4P56470 323 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 SELENOTP62341 195 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 PLGLAQ15195 96 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 CCDC144NLQ6NUI1 221 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
ITGA4-201ENST00000233573 PQLC2Q6ZP29 291 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms