RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TRBV12-3P01733 135 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
SF3B6-201ENST00000233468 GPR183P32249 361 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 OPRK1P41145 380 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 MFAP2P55001 183 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
SF3B6-201ENST00000233468 C2orf83Q53S99 150 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 UBAC2Q8NBM4 344 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 ZNF431Q8TF32 576 aaPredicted RBP8.64□□□□□ -1.03
SF3B6-201ENST00000233468 CCDC140Q96MF4 163 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
SF3B6-201ENST00000233468 SIGLEC8Q9NYZ4 499 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 TNCP24821 2201 aa8.64□□□□□ -1.03
SF3B6-201ENST00000233468 ZNF320A2RRD8 509 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 OR2T8A6NH00 312 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 PPP5D1E7EU14 171 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 LGALS9O00182 355 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 EREGO14944 169 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 GNG7O60262 68 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 OR2C1O95371 312 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 IL5P05113 134 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 SLC25A4P12235 298 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 NPY1RP25929 384 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 RAB11AP62491 216 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 EGFEM1PQ0D2K5 195 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 BSXQ3C1V8 233 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 PVRIGQ6DKI7 326 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 RBKSQ9H477 322 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 UFC1Q9Y3C8 167 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 S4R3C0 116 aa8.63□□□□□ -1.03
SF3B6-201ENST00000233468 TRAV30A0A087WSZ9 112 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 IGHV3-21A0A0B4J1V1 117 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 SYNGR2O43760 224 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 NXPH3O95157 252 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 IFNA4P05014 189 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 NKX2-1P43699 371 aaPredicted RBP8.62□□□□□ -1.03
SF3B6-201ENST00000233468 ELLP55199 621 aaPredicted RBP8.62□□□□□ -1.03
SF3B6-201ENST00000233468 IFITM3Q01628 133 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 NRARPQ7Z6K4 114 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
SF3B6-201ENST00000233468 UXS1Q8NBZ7 420 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 MARC2Q969Z3 335 aa8.62□□□□□ -1.03
SF3B6-201ENST00000233468 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 NDUFA4O00483 81 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 ADAP1O75689 374 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 IAH1Q2TAA2 248 aaPredicted RBP8.61□□□□□ -1.03
SF3B6-201ENST00000233468 OR52B4Q8NGK2 314 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 OR2K2Q8NGT1 345 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 OR4X1Q8NH49 305 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 TECRQ9NZ01 308 aaKnown RBP8.61□□□□□ -1.03
SF3B6-201ENST00000233468 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
SF3B6-201ENST00000233468 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 FAM25EA8MYX2 175 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 BMI1P35226 326 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 GPX4P36969 197 aaPredicted RBP8.6□□□□□ -1.03
SF3B6-201ENST00000233468 ID3Q02535 119 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 C11orf87Q6NUJ2 197 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 DYNLRB2Q8TF09 96 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 CACNG8Q8WXS5 425 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 SEC22CQ9BRL7 303 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 MARVELD1Q9BSK0 173 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
SF3B6-201ENST00000233468 ZC4H2Q9NQZ6 224 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 GSKIPQ9P0R6 139 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 PAIP2BQ9ULR5 123 aaKnown RBP8.6□□□□□ -1.03
SF3B6-201ENST00000233468 ZNF256Q9Y2P7 627 aaPredicted RBP8.6□□□□□ -1.03
SF3B6-201ENST00000233468 RYR3Q15413 4870 aa8.6□□□□□ -1.03
SF3B6-201ENST00000233468 A8MWP6 167 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
SF3B6-201ENST00000233468 K7EIL1 84 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 K7EMT4 169 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 CLN5O75503 358 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 YIF1AO95070 293 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 PTTG1O95997 202 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 IGLV1-51P01701 117 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 CSN3P07498 182 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 CTSGP08311 255 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 IAPPP10997 89 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 GSG1LQ6UXU4 331 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
SF3B6-201ENST00000233468 OR4D5Q8NGN0 318 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 TMEM190Q8WZ59 177 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 RAB40CQ96S21 281 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 GINS3Q9BRX5 216 aa8.59□□□□□ -1.03
SF3B6-201ENST00000233468 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
SF3B6-201ENST00000233468 MRPL27Q9P0M9 148 aaKnown RBP8.59□□□□□ -1.03
SF3B6-201ENST00000233468 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
SF3B6-201ENST00000233468 C2orf70A6NJV1 201 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 L7N2F9 121 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 SCAF4O95104 1147 aaKnown RBP8.58□□□□□ -1.04
SF3B6-201ENST00000233468 TMEM50AO95807 157 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 SCGB1D2O95969 90 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 FABP1P07148 127 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 FOLR2P14207 255 aa8.58□□□□□ -1.04
SF3B6-201ENST00000233468 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms