RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 SGMS2Q8NHU3 365 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 SLC25A22Q9H936 323 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 DMRT1Q9Y5R6 373 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 TCRBV4S1A1TA0A5B7 111 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 I3L2K1 104 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 M0QZK8 103 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 IFNA1P01562 189 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 TAGLN2P37802 199 aaKnown RBP18.8■□□□□ 0.6
RRP9-201ENST00000232888 RND2P52198 227 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 RHOBP62745 196 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 ASPHD1Q5U4P2 390 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 C16orf82Q7Z2V1 217 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 NANPQ8TBE9 248 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 TRGV9Q99603 122 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 FAM103A1Q9BTL3 118 aaKnown RBP18.8■□□□□ 0.6
RRP9-201ENST00000232888 TMEM231Q9H6L2 316 aa18.8■□□□□ 0.6
RRP9-201ENST00000232888 FSHBP01225 129 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 EGR2P11161 476 aaPredicted RBP18.79■□□□□ 0.6
RRP9-201ENST00000232888 KHDC3LQ587J8 217 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 ZNF506Q5JVG8 444 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 C10orf91Q5T1B1 145 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 RBMS3Q6XE24 437 aaKnown RBP18.79■□□□□ 0.6
RRP9-201ENST00000232888 FOXC2Q99958 501 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 SEC11CQ9BY50 192 aa18.79■□□□□ 0.6
RRP9-201ENST00000232888 A6NDX4 124 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 ZFP92A6NM28 416 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 C9orf139Q6ZV77 190 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 OR4X1Q8NH49 305 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 RNF2Q99496 336 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 THYN1Q9P016 225 aa18.78■□□□□ 0.6
RRP9-201ENST00000232888 PPT1P50897 306 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 KLK9Q2XQG4 91 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 GCSAMLQ5JQS6 135 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 CCDC28AQ8IWP9 274 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 TEX29Q8N6K0 151 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 KLK9Q9UKQ9 250 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 CARHSP1Q9Y2V2 147 aaKnown RBP18.77■□□□□ 0.6
RRP9-201ENST00000232888 HELZ2Q9BYK8 2649 aaKnown RBP18.77■□□□□ 0.6
RRP9-201ENST00000232888 POLQO75417 2590 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 CENPEQ02224 2701 aa18.77■□□□□ 0.6
RRP9-201ENST00000232888 NAV3Q8IVL0 2385 aa18.77■□□□□ 0.59
RRP9-201ENST00000232888 IGLV11-55A0A075B6I3 123 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 IGKV1D-37A0A075B6S9 117 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 HIST1H1BP16401 226 aaKnown RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 FGF8P55075 233 aaPredicted RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 C19orf35Q6ZS72 473 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 HSPB9Q9BQS6 159 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 SLC35B3Q9H1N7 401 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 MRPL36Q9P0J6 103 aaKnown RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 F8W036 122 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 H3BUX3 64 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 NDUFS6O75380 124 aaKnown RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 HSPB1P04792 205 aaKnown RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 SFTA3P0C7M3 94 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 PSMB3P49720 205 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 FAM110DQ8TAY7 271 aaPredicted RBP18.76■□□□□ 0.59
RRP9-201ENST00000232888 GATAD1Q8WUU5 269 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 TNFRSF19Q9NS68 423 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 GNG13Q9P2W3 67 aa18.76■□□□□ 0.59
RRP9-201ENST00000232888 ABCA12Q86UK0 2595 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 LOC102723971A0A1B0GUV8 181 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 K7EIM0 57 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 STAG3L2P0CL84 134 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 STAG3L3P0CL85 134 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 BCL2P10415 239 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 CRIP2P52943 208 aaPredicted RBP18.75■□□□□ 0.59
RRP9-201ENST00000232888 HAGHQ16775 308 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 AKIRIN2Q53H80 203 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 SLC35E3Q7Z769 313 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 TMEM219Q86XT9 240 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 OR1L4Q8NGR5 311 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 FANCD2OSQ96PS1 177 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 MANBALQ9NQG1 85 aa18.75■□□□□ 0.59
RRP9-201ENST00000232888 C9JQL5 133 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 FABP1P07148 127 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 ICAM4Q14773 271 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 ZNF48Q96MX3 618 aaPredicted RBP18.74■□□□□ 0.59
RRP9-201ENST00000232888 PFDN5Q99471 154 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 RARRES2Q99969 163 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 APCP25054 2843 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 CR1P17927 2039 aa18.74■□□□□ 0.59
RRP9-201ENST00000232888 CXorf1O96002 111 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 IGHV3-48P01763 117 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 APOC3P02656 99 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 OR5G3P0C626 314 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 WFDC11Q8NEX6 87 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 MRPL32Q9BYC8 188 aaKnown RBP18.73■□□□□ 0.59
RRP9-201ENST00000232888 VAX2Q9UIW0 290 aa18.73■□□□□ 0.59
RRP9-201ENST00000232888 PRRC2AP48634 2157 aaKnown RBP18.73■□□□□ 0.59
RRP9-201ENST00000232888 ATP6V0E1O15342 81 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 CLN5O75503 358 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 AMY1AP04745 511 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 UNQ5815/PRO19632Q6UWF5 114 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 DNAJC4Q9NNZ3 241 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 FUT9Q9Y231 359 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 SOX21Q9Y651 276 aaPredicted RBP18.72■□□□□ 0.59
RRP9-201ENST00000232888 TRAV30A0A087WSZ9 112 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 ADCYAP1P18509 176 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 NPBWR1P48145 328 aa18.72■□□□□ 0.59
RRP9-201ENST00000232888 SVBPQ8N300 66 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms