RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 TAGLN2P37802 199 aaKnown RBP18.03■□□□□ 0.48
CDX1-201ENST00000231656 CD81P60033 236 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 HABP2Q14520 560 aaPredicted RBP18.03■□□□□ 0.48
CDX1-201ENST00000231656 SLC16A13Q7RTY0 426 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 SLC35E3Q7Z769 313 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 DYNAPQ8N1N2 210 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 RNASEH2CQ8TDP1 164 aaKnown RBP18.03■□□□□ 0.48
CDX1-201ENST00000231656 GATAD1Q8WUU5 269 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 AJUBAQ96IF1 538 aa18.03■□□□□ 0.48
CDX1-201ENST00000231656 METTL1Q9UBP6 276 aaKnown RBP18.03■□□□□ 0.48
CDX1-201ENST00000231656 FLNBO75369 2602 aaKnown RBP18.02■□□□□ 0.48
CDX1-201ENST00000231656 IGHV3OR16-10A0A075B7F0 116 aa18.02■□□□□ 0.48
CDX1-201ENST00000231656 A0A1W2PPV4 95 aa18.02■□□□□ 0.48
CDX1-201ENST00000231656 J3QLI3 93 aa18.02■□□□□ 0.48
CDX1-201ENST00000231656 RPL27AP46776 148 aaKnown RBP18.02■□□□□ 0.48
CDX1-201ENST00000231656 COMPP49747 757 aaPredicted RBP18.02■□□□□ 0.48
CDX1-201ENST00000231656 MEF2BQ02080 365 aaPredicted RBP18.02■□□□□ 0.48
CDX1-201ENST00000231656 PPP1R27Q86WC6 154 aa18.02■□□□□ 0.48
CDX1-201ENST00000231656 MALSU1Q96EH3 234 aa18.02■□□□□ 0.48
CDX1-201ENST00000231656 OOSP1A8MZH6 123 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 IGHV4-38-2P0DP08 117 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 PSMB3P49720 205 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 SUB1P53999 127 aaKnown RBP eCLIP18.02■□□□□ 0.47
CDX1-201ENST00000231656 TNXAQ16473 311 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 CYB5R2Q6BCY4 276 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 PVRIGQ6DKI7 326 aa18.02■□□□□ 0.47
CDX1-201ENST00000231656 NDUFS6O75380 124 aaKnown RBP18.01■□□□□ 0.47
CDX1-201ENST00000231656 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
CDX1-201ENST00000231656 CCDC144NLQ6NUI1 221 aa18.01■□□□□ 0.47
CDX1-201ENST00000231656 FBXL15Q9H469 300 aa18.01■□□□□ 0.47
CDX1-201ENST00000231656 LOC105371267A0A1B0GV96 52 aa18■□□□□ 0.47
CDX1-201ENST00000231656 ACTL6BO94805 426 aa18■□□□□ 0.47
CDX1-201ENST00000231656 STAG3L2P0CL84 134 aa18■□□□□ 0.47
CDX1-201ENST00000231656 STAG3L3P0CL85 134 aa18■□□□□ 0.47
CDX1-201ENST00000231656 ATF4P18848 351 aaPredicted RBP18■□□□□ 0.47
CDX1-201ENST00000231656 SSBP2P81877 361 aaPredicted RBP18■□□□□ 0.47
CDX1-201ENST00000231656 ZNF114Q8NC26 417 aa18■□□□□ 0.47
CDX1-201ENST00000231656 NIPSNAP3BQ9BS92 247 aa18■□□□□ 0.47
CDX1-201ENST00000231656 FNDC4Q9H6D8 234 aaPredicted RBP18■□□□□ 0.47
CDX1-201ENST00000231656 TLN2Q9Y4G6 2542 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 SMAD7O15105 426 aaKnown RBP17.99■□□□□ 0.47
CDX1-201ENST00000231656 REG1AP05451 166 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 OR10J1P30954 320 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 KLF17Q5JT82 389 aaPredicted RBP17.99■□□□□ 0.47
CDX1-201ENST00000231656 BRD3OSQ6XYD6 125 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 IQCF2Q8IXL9 164 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 MRPL41Q8IXM3 137 aaKnown RBP17.99■□□□□ 0.47
CDX1-201ENST00000231656 OR2T6Q8NHC8 308 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 ABHD5Q8WTS1 349 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 TVP23CQ96ET8 276 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 SLC35E1Q96K37 410 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 TUBA4BQ9H853 241 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 ZFHX3Q15911 3703 aa17.99■□□□□ 0.47
CDX1-201ENST00000231656 TEX22C9J3V5 150 aa17.98■□□□□ 0.47
CDX1-201ENST00000231656 PAGE4O60829 102 aa17.98■□□□□ 0.47
CDX1-201ENST00000231656 RHOBP62745 196 aa17.98■□□□□ 0.47
CDX1-201ENST00000231656 ACANP16112 2415 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 COLCA2A8K830 154 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 ARL14EPLP0DKL9 152 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 AREGP15514 252 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 GNB1P62873 340 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 SPATA31B1PQ5VZV4 182 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 SEPSECSQ9HD40 501 aaKnown RBP17.97■□□□□ 0.47
CDX1-201ENST00000231656 BAHCC1Q9P281 2608 aa17.97■□□□□ 0.47
CDX1-201ENST00000231656 TMEM250H0YL14 139 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 FCN1O00602 326 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 CXorf1O96002 111 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 MFAP2P55001 183 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 NPBQ8NG41 125 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 ACY3Q96HD9 319 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 MOSP00540 346 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 SPNS3Q6ZMD2 512 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 C15orf54Q8N8G6 183 aa17.96■□□□□ 0.47
CDX1-201ENST00000231656 NBR2O15453 112 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 NDUFA3O95167 84 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 CD24P25063 80 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 MMDQ15546 238 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 FBLN7Q53RD9 439 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 THAP8Q8NA92 274 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 OR4F5Q8NH21 305 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 SRSF12Q8WXF0 261 aaKnown RBP17.95■□□□□ 0.46
CDX1-201ENST00000231656 EAF1Q96JC9 268 aaPredicted RBP17.95■□□□□ 0.46
CDX1-201ENST00000231656 OR4F4Q96R69 305 aa17.95■□□□□ 0.46
CDX1-201ENST00000231656 MRPL36Q9P0J6 103 aaKnown RBP17.95■□□□□ 0.46
CDX1-201ENST00000231656 OTOGQ6ZRI0 2925 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 CRYGCP07315 174 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 GATA2P23769 480 aaPredicted RBP17.94■□□□□ 0.46
CDX1-201ENST00000231656 CYP2G1PQ6ZSU1 146 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 A0A087WWC5 75 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 A0A0U1RQK1 487 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 PLGLAQ15195 96 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 C19orf35Q6ZS72 473 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 OR1P1Q8NH06 330 aa17.94■□□□□ 0.46
CDX1-201ENST00000231656 IGKV1D-37A0A075B6S9 117 aa17.93■□□□□ 0.46
CDX1-201ENST00000231656 ZNF727A8MUV8 499 aa17.93■□□□□ 0.46
CDX1-201ENST00000231656 C11orf94C9JXX5 98 aa17.93■□□□□ 0.46
CDX1-201ENST00000231656 APELAP0DMC3 54 aa17.93■□□□□ 0.46
CDX1-201ENST00000231656 PNRC1Q12796 327 aaPredicted RBP17.93■□□□□ 0.46
CDX1-201ENST00000231656 NPIPB3Q92617 1050 aa17.93■□□□□ 0.46
CDX1-201ENST00000231656 SRSF8Q9BRL6 282 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms