RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 SRD5A3Q9H8P0 318 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 IGKV1OR2-108A0A075B7D4 117 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 IGHV1-3A0A0C4DH29 117 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 ENSAO43768 121 aaKnown RBP13.57□□□□□ -0.24
GAPDH-201ENST00000229239 PRSS8Q16651 343 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 LINC01551Q86U37 167 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
GAPDH-201ENST00000229239 SRSF8Q9BRL6 282 aaKnown RBP13.57□□□□□ -0.24
GAPDH-201ENST00000229239 TACC2O95359 2948 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 MYO9AB2RTY4 2548 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 HOXA5P20719 270 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 LCN2P80188 198 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 DTX2Q86UW9 622 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 C22orf15Q8WYQ4 148 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 RPEQ96AT9 228 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 TNCP24821 2201 aa13.56□□□□□ -0.24
GAPDH-201ENST00000229239 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
GAPDH-201ENST00000229239 C9JCJ5 164 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 E7EUB6 86 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 M0R1W7 72 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 SPATA31B1PQ5VZV4 182 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 C12orf57Q99622 126 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 ELOA3CA0A087WX78 387 aaPredicted RBP13.55□□□□□ -0.24
GAPDH-201ENST00000229239 LY6LH3BQJ8 138 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 C8orf88P0DMB2 117 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 RPL27AP46776 148 aaKnown RBP13.55□□□□□ -0.24
GAPDH-201ENST00000229239 FAM3BP58499 235 aaPredicted RBP13.55□□□□□ -0.24
GAPDH-201ENST00000229239 PSG5Q15238 335 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 MIR17HGQ75NE6 70 aa13.55□□□□□ -0.24
GAPDH-201ENST00000229239 PDZD2O15018 2839 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 A0A1W2PPI3 338 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 PPP5D1E7EU14 171 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
GAPDH-201ENST00000229239 TRGC2P03986 189 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 TYMSP04818 313 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 CDX1P47902 265 aaPredicted RBP13.54□□□□□ -0.24
GAPDH-201ENST00000229239 BPIFB3P59826 476 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 MOB3BQ86TA1 216 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 SIGLEC9Q9Y336 463 aa13.54□□□□□ -0.24
GAPDH-201ENST00000229239 YTHDF2Q9Y5A9 579 aaKnown RBP13.54□□□□□ -0.24
GAPDH-201ENST00000229239 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 CEACAM3P40198 252 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 S100A12P80511 92 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 C10orf55Q5SWW7 151 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 C1orf122Q6ZSJ8 110 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 OR11H6Q8NGC7 330 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 SLC25A33Q9BSK2 321 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 CSMD1Q96PZ7 3565 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BKO60814 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 CRYGCP07315 174 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BCP62807 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 FOXL1Q12952 345 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 MLANAQ16655 118 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST2H2BEQ16778 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.53□□□□□ -0.24
GAPDH-201ENST00000229239 PPP1R27Q86WC6 154 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 OR1P1Q8NH06 330 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BHQ93079 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 ACY3Q96HD9 319 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 RITA1Q96K30 269 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BNQ99877 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 HIST1H2BMQ99879 126 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 ONECUT1Q9UBC0 465 aa13.53□□□□□ -0.24
GAPDH-201ENST00000229239 TRAV9-1A0A075B6T8 112 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 MDFIC2A0A1B0GVS7 189 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 PSMB11A5LHX3 300 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 FOXH1O75593 365 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 COX7A1P24310 79 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 STXBP6Q8NFX7 210 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 OR2T6Q8NHC8 308 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
GAPDH-201ENST00000229239 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
GAPDH-201ENST00000229239 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 SCO2A0A1W2PP80 73 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 C22orf46C9J442 243 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 SOD3P08294 240 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 HTR1DP28221 377 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 TNXAQ16473 311 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 TPTE2P1Q5T6R2 138 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 SFRP2Q96HF1 295 aa13.51□□□□□ -0.25
GAPDH-201ENST00000229239 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 OR7C2O60412 319 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 NDUFA6P56556 154 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 KIR3DL3Q8N743 410 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 NPIPB3Q92617 1050 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 TRGV9Q99603 122 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 SSBP3Q9BWW4 388 aaPredicted RBP13.5□□□□□ -0.25
GAPDH-201ENST00000229239 DPM3Q9P2X0 92 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 LOC105371242A0A075B767 164 aa13.5□□□□□ -0.25
GAPDH-201ENST00000229239 PRTN3P24158 256 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms