RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MLANAQ16655 118 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 ODF3L2Q3SX64 289 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 PYDC2Q56P42 97 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.59□□□□□ -0.71
GPN3-201ENST00000228827 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 OR4C46A6NHA9 309 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 CEBPZOSA8MTT3 80 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 TMEM50AO95807 157 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 AKR1C4P17516 323 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 TMEM187Q14656 261 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
GPN3-201ENST00000228827 HEYLQ9NQ87 328 aaPredicted RBP10.58□□□□□ -0.72
GPN3-201ENST00000228827 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
GPN3-201ENST00000228827 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
GPN3-201ENST00000228827 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
GPN3-201ENST00000228827 CORTO00230 105 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 APOHP02749 345 aaPredicted RBP10.57□□□□□ -0.72
GPN3-201ENST00000228827 ZNF600Q6ZNG1 722 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 SCGB3A2Q96PL1 93 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 GINS3Q9BRX5 216 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 KCNIP3Q9Y2W7 256 aa10.57□□□□□ -0.72
GPN3-201ENST00000228827 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
GPN3-201ENST00000228827 A0A1B0GU03 582 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
GPN3-201ENST00000228827 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 AARDQ4LEZ3 155 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 WFDC3Q8IUB2 231 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
GPN3-201ENST00000228827 CLN5O75503 358 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 SULT1A3P0DMM9 295 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 SULT1A4P0DMN0 295 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 HTR2BP41595 481 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
GPN3-201ENST00000228827 ZNF124Q15973 351 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 LYZL2Q7Z4W2 148 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 TRIM63Q969Q1 353 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 GALNT14Q96FL9 552 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 V9GYH0 126 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 STARD9Q9P2P6 4700 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 S100A5P33763 92 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 FAUP35544 74 aaKnown RBP10.55□□□□□ -0.72
GPN3-201ENST00000228827 APOC4P55056 127 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 SUPT4H1P63272 117 aaKnown RBP10.55□□□□□ -0.72
GPN3-201ENST00000228827 TIGITQ495A1 244 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 TMED4Q7Z7H5 227 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 SLC24A4Q8NFF2 622 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 IL22RA2Q969J5 263 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 BOLA1Q9Y3E2 137 aa10.55□□□□□ -0.72
GPN3-201ENST00000228827 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 DFFBO76075 338 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 ANXA3P12429 323 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 BMI1P35226 326 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 AP3S2P59780 193 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
GPN3-201ENST00000228827 ZNF79Q15937 498 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 C2orf83Q53S99 150 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 FAM90A2PQ658T7 463 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 LGI3Q8N145 548 aa10.54□□□□□ -0.72
GPN3-201ENST00000228827 RBM38Q9H0Z9 239 aaKnown RBP10.54□□□□□ -0.72
GPN3-201ENST00000228827 A0A0B4J2A0 478 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 CCR6P51684 374 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 RND2P52198 227 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 TMEM170AQ8WVE7 144 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 VSIRQ9H7M9 311 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 SHPKQ9UHJ6 478 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 RYR2Q92736 4967 aa10.53□□□□□ -0.72
GPN3-201ENST00000228827 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.72
GPN3-201ENST00000228827 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
GPN3-201ENST00000228827 SPRY2O43597 315 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 IFNA10P01566 189 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 NPPCP23582 126 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 NPY1RP25929 384 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 SMCO1Q147U7 214 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 PRSS54Q6PEW0 395 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 CCDC190Q86UF4 302 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 STPG3Q8N7X2 389 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.73
GPN3-201ENST00000228827 DTD1Q8TEA8 209 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 METTL26Q96S19 204 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 MS4A6AQ9H2W1 248 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 RBKSQ9H477 322 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
GPN3-201ENST00000228827 CSMD3Q7Z407 3707 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms