RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TGFAP01135 160 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 SOD3P08294 240 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 TIMP3P35625 211 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
NOD1-201ENST00000222823 DUX5Q96PT3 197 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 PLSCR4Q9NRQ2 329 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 ARFGEF3Q5TH69 2177 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 A0A1B0GUT8 65 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 NBR2O15453 112 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 IGHV1-46P01743 117 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 UQCRFS1P47985 274 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 IGKV1-27A0A075B6S5 117 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 TAS2R60P59551 318 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 SLX1AQ9BQ83 275 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 IL18BPO95998 194 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 Q0VFX4 171 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 HERPUD1Q15011 391 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 ATOH7Q8N100 152 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 OR4D5Q8NGN0 318 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 CBLN4Q9NTU7 201 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 MUC22E2RYF6 1773 aaPredicted RBP9.57□□□□□ -0.88
NOD1-201ENST00000222823 H3BVH4 76 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 PSPNO60542 156 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 CD24P25063 80 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 RNF144BQ7Z419 303 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 BMPERQ8N8U9 685 aa9.57□□□□□ -0.88
NOD1-201ENST00000222823 C9JCJ5 164 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 M0R381 172 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 SELLP14151 372 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 ZNF56Q15929 161 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 DMRTA2Q96SC8 542 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 RPUSD1Q9UJJ7 312 aaKnown RBP9.56□□□□□ -0.88
NOD1-201ENST00000222823 WDR83OSQ9Y284 106 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 PCNX2A6NKB5 2137 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 A0A087WWC5 75 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 C5orf63A6NC05 138 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 K7ERU9 68 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 RPL23P62829 140 aaKnown RBP9.56□□□□□ -0.88
NOD1-201ENST00000222823 CD69Q07108 199 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
NOD1-201ENST00000222823 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 DPRXA6NFQ7 191 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 CEACAM4O75871 244 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
NOD1-201ENST00000222823 UBE2L6O14933 153 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 TCF21O43680 179 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 NAPSAO96009 420 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 COX6CP09669 75 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 FOXL2NBQ6ZUU3 175 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 GAGE10A6NGK3 116 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 IGHV3-11P01762 117 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 CCL20P78556 96 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 CIARTQ8N365 385 aaPredicted RBP9.55□□□□□ -0.88
NOD1-201ENST00000222823 Q9H3A6 140 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 C7orf71A4D174 169 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 SMAD7O15105 426 aaKnown RBP9.55□□□□□ -0.88
NOD1-201ENST00000222823 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 MUC21Q5SSG8 566 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 TUBA4BQ9H853 241 aa9.55□□□□□ -0.88
NOD1-201ENST00000222823 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 C1QTNF9BB2RNN3 333 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 H7C2G1 150 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 SRSF7Q16629 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
NOD1-201ENST00000222823 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
NOD1-201ENST00000222823 CENPFP49454 3210 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 THBDP07204 575 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 LY6DQ14210 128 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 MDS2Q8NDY4 140 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
NOD1-201ENST00000222823 ANAPC10Q9UM13 185 aa9.54□□□□□ -0.88
NOD1-201ENST00000222823 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 TIMM23O14925 209 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 FABP2P12104 132 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 NUTF2P61970 127 aaKnown RBP9.53□□□□□ -0.88
NOD1-201ENST00000222823 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
NOD1-201ENST00000222823 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 HEPN1Q6WQI6 88 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 ERASQ7Z444 233 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 GTF3C1Q12789 2109 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 TMEM42Q69YG0 159 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 ZNF414Q96IQ9 312 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 C18orf15Q96N68 181 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 WFDC1Q9HC57 220 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms