RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 FAM71F2Q6NXP2 309 aa11.29□□□□□ -0.6
LAMB1-201ENST00000222399 STHQ8IWL8 128 aa11.29□□□□□ -0.6
LAMB1-201ENST00000222399 WNT2P09544 360 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 FAM166AQ6J272 317 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 CD55P08174 381 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
LAMB1-201ENST00000222399 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
LAMB1-201ENST00000222399 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 LY6DQ14210 128 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
LAMB1-201ENST00000222399 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
LAMB1-201ENST00000222399 TRAV21A0A0B4J279 112 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 CACNG7P62955 275 aa11.28□□□□□ -0.6
LAMB1-201ENST00000222399 BEX4Q9NWD9 120 aaPredicted RBP11.27□□□□□ -0.6
LAMB1-201ENST00000222399 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.6
LAMB1-201ENST00000222399 CD24P25063 80 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 IGHV2-26A0A0B4J1V2 119 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 H0YIZ8 118 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 CD7P09564 240 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 Q0VFX4 171 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
LAMB1-201ENST00000222399 FOXG1P55316 489 aaPredicted RBP11.27□□□□□ -0.61
LAMB1-201ENST00000222399 EFNB3Q15768 340 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 CYB5R2Q6BCY4 276 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
LAMB1-201ENST00000222399 TMEM50AO95807 157 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 EFNA4P52798 201 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 DNAJC13O75165 2243 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 C1QTNF9BB2RNN3 333 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 PYYP10082 97 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 CTAG1AP78358 180 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
LAMB1-201ENST00000222399 HEPN1Q6WQI6 88 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 MDS2Q8NDY4 140 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 PAX8Q06710 450 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 TMEM170AQ8WVE7 144 aa11.26□□□□□ -0.61
LAMB1-201ENST00000222399 FGF16O43320 207 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 RNF5Q99942 180 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 TMEM178BH3BS89 294 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 OVOL1O14753 267 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 TRAV41A0A0B4J266 112 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 VMO1Q7Z5L0 202 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 SCN8AQ9UQD0 1980 aa11.25□□□□□ -0.61
LAMB1-201ENST00000222399 PNRC2Q9NPJ4 139 aaKnown RBP11.24□□□□□ -0.61
LAMB1-201ENST00000222399 SPTBP11277 2137 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 LDLRAD4O15165 306 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 MINOS1Q5TGZ0 78 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 JKAMPQ9P055 326 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 MINOS1-NBL1R4GNA1 71 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 EMP1P54849 157 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
LAMB1-201ENST00000222399 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
LAMB1-201ENST00000222399 PPBPP02775 128 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 CNTFRP26992 372 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 SIGLEC15Q6ZMC9 328 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 NDUFA3O95167 84 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 ADMP35318 185 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 SRSF1Q07955 248 aaKnown RBP eCLIP11.23□□□□□ -0.619e-7■■■□□ 16.6
LAMB1-201ENST00000222399 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 FAM19A2Q8N3H0 131 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 CD177Q8N6Q3 437 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 OR10W1Q8NGF6 305 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 DOCK6Q96HP0 2047 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-201ENST00000222399 MLNRO43193 412 aa11.23□□□□□ -0.61
LAMB1-201ENST00000222399 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
LAMB1-201ENST00000222399 MBD3L4A6NDZ8 208 aaPredicted RBP11.22□□□□□ -0.61
LAMB1-201ENST00000222399 MBD3L3A6NE82 208 aaPredicted RBP11.22□□□□□ -0.61
LAMB1-201ENST00000222399 MBD3L5A6NJ08 208 aaPredicted RBP11.22□□□□□ -0.61
LAMB1-201ENST00000222399 TDGF1P13385 188 aa11.22□□□□□ -0.61
LAMB1-201ENST00000222399 MBD3L2Q8NHZ7 208 aaPredicted RBP11.22□□□□□ -0.61
LAMB1-201ENST00000222399 RP1P56715 2156 aa11.22□□□□□ -0.61
LAMB1-201ENST00000222399 SERF1AO75920 110 aa11.22□□□□□ -0.61
LAMB1-201ENST00000222399 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms