RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MBD2Q9UBB5 411 aa12.69□□□□□ -0.38
LIM2-201ENST00000221973 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 CCNKO75909 580 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
LIM2-201ENST00000221973 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 VN1R17PQ8TDU5 208 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 SCARB1Q8WTV0 552 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 DCUN1D4Q92564 292 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 EEF1AKMT3Q96AZ1 226 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
LIM2-201ENST00000221973 FNDC4Q9H6D8 234 aaPredicted RBP12.68□□□□□ -0.38
LIM2-201ENST00000221973 RPS10-NUDT3A0A1W2PQS6 291 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 P2RY1P47900 373 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 FGL1Q08830 312 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 ZNF343Q6P1L6 599 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
LIM2-201ENST00000221973 LYRM2Q9NU23 88 aaPredicted RBP12.67□□□□□ -0.38
LIM2-201ENST00000221973 PMS2P5A8MQ11 134 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 CST7O76096 145 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
LIM2-201ENST00000221973 CD69Q07108 199 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 ACSM6Q6P461 480 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 CLEC19AQ6UXS0 136 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 C8orf86Q6ZUL3 223 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 UBAC2Q8NBM4 344 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 ZNF502Q8TBZ5 544 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 C21orf62Q9NYP8 219 aa12.66□□□□□ -0.38
LIM2-201ENST00000221973 TRBV7-1A0A0A6YYK4 115 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 G3V3Q6 166 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 I3L521 148 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 TRBV12-3P01733 135 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 LYL1P12980 280 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 MFAP4P55083 255 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 ARL16Q0P5N6 197 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 Q56UQ5 140 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 HAPLN4Q86UW8 402 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 TMEM217Q8N7C4 229 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 ST6GAL2Q96JF0 529 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 CCDC140Q96MF4 163 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 ZC4H2Q9NQZ6 224 aa12.65□□□□□ -0.38
LIM2-201ENST00000221973 MRPL36Q9P0J6 103 aaKnown RBP12.65□□□□□ -0.38
LIM2-201ENST00000221973 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.64□□□□□ -0.39
LIM2-201ENST00000221973 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 CLEC3BP05452 202 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 GPR183P32249 361 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 GPX4P36969 197 aaPredicted RBP12.64□□□□□ -0.39
LIM2-201ENST00000221973 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 STX12Q86Y82 276 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 ACY3Q96HD9 319 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 SLC25A31Q9H0C2 315 aa12.64□□□□□ -0.39
LIM2-201ENST00000221973 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
LIM2-201ENST00000221973 OR2T8A6NH00 312 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 PPP5D1E7EU14 171 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
LIM2-201ENST00000221973 SLC25A4P12235 298 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 SULT1A1P50225 295 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 RND2P52198 227 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 RUNX1Q01196 453 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 EWSR1Q01844 656 aaKnown RBP eCLIP12.63□□□□□ -0.39
LIM2-201ENST00000221973 NHLH2Q02577 135 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 ACOT7LQ6ZUV0 252 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 CACNG8Q8WXS5 425 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
LIM2-201ENST00000221973 IGHV4OR15-8A0A075B7B6 117 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 A0A087WW49 117 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 HSPB1P04792 205 aaKnown RBP12.62□□□□□ -0.39
LIM2-201ENST00000221973 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
LIM2-201ENST00000221973 NPBWR1P48145 328 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 SLC38A11Q08AI6 406 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 GAMTQ14353 236 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 ZNF546Q86UE3 836 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 NPIPB3Q92617 1050 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 DPF1Q92782 380 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 RAX2Q96IS3 184 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 TXN2Q99757 166 aa12.62□□□□□ -0.39
LIM2-201ENST00000221973 KMT2CQ8NEZ4 4911 aaKnown RBP12.61□□□□□ -0.39
LIM2-201ENST00000221973 SMCO3A2RU48 225 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 CCL24O00175 119 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 GNG7O60262 68 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 ARL3P36405 182 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
LIM2-201ENST00000221973 DLK1P80370 383 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 FAM209BQ5JX69 171 aa12.61□□□□□ -0.39
LIM2-201ENST00000221973 TCTE3Q8IZS6 198 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms