RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
UBR5-201ENST00000220959 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 FAM19A2Q8N3H0 131 aa12.47□□□□□ -0.41
UBR5-201ENST00000220959 ZP1P60852 638 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
UBR5-201ENST00000220959 DPM2O94777 84 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 HBDP02042 147 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 ZNF600Q6ZNG1 722 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 WNT2P09544 360 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 GATA2P23769 480 aaPredicted RBP12.46□□□□□ -0.41
UBR5-201ENST00000220959 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
UBR5-201ENST00000220959 FBLN7Q53RD9 439 aa12.46□□□□□ -0.42
UBR5-201ENST00000220959 UMODP07911 640 aa12.46□□□□□ -0.42
UBR5-201ENST00000220959 CCL3L1P16619 93 aa12.46□□□□□ -0.42
UBR5-201ENST00000220959 A0A0U1RRA0 63 aa12.46□□□□□ -0.42
UBR5-201ENST00000220959 HOXA3O43365 443 aaPredicted RBP12.46□□□□□ -0.42
UBR5-201ENST00000220959 SFTA2Q6UW10 78 aa12.46□□□□□ -0.42
UBR5-201ENST00000220959 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 CD24P25063 80 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
UBR5-201ENST00000220959 ZNF883P0CG24 379 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 CD33P20138 364 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 CHCHD2Q9Y6H1 151 aaPredicted RBP12.45□□□□□ -0.42
UBR5-201ENST00000220959 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
UBR5-201ENST00000220959 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 EVI2AP22794 236 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 PAX8Q06710 450 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 LINC01590Q5TEZ4 76 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 WFDC6Q9BQY6 131 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 A0A0G2JK05 382 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 WISP3O95389 354 aaPredicted RBP12.45□□□□□ -0.42
UBR5-201ENST00000220959 THBDP07204 575 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 C1QL2Q7Z5L3 287 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 GBF1Q92538 1859 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 SAP30O75446 220 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 DTX1Q86Y01 620 aa12.45□□□□□ -0.42
UBR5-201ENST00000220959 MORN3Q6PF18 240 aaPredicted RBP12.44□□□□□ -0.42
UBR5-201ENST00000220959 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 LAMB2P55268 1798 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 C1QTNF5Q9BXJ0 243 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 YPEL1O60688 119 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 ORMDL2Q53FV1 153 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 UPK2O00526 184 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 CD200R1LQ6Q8B3 271 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 TMEM133Q9H2Q1 129 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 C9orf106Q8NAJ2 232 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 DERL1Q9BUN8 251 aa12.44□□□□□ -0.42
UBR5-201ENST00000220959 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 TOMM40O96008 361 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 SSBP4Q9BWG4 385 aaPredicted RBP12.43□□□□□ -0.42
UBR5-201ENST00000220959 CLDN16Q9Y5I7 305 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 PPIFP30405 207 aaKnown RBP12.43□□□□□ -0.42
UBR5-201ENST00000220959 UCP1P25874 307 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 CFHR5Q9BXR6 569 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 IGHV3-64A0A075B6Q5 118 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 RAMP1O60894 148 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 SIGLEC15Q6ZMC9 328 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
UBR5-201ENST00000220959 NHP2Q9NX24 153 aaKnown RBP12.43□□□□□ -0.42
UBR5-201ENST00000220959 A0A1W2PR77 199 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 LRRK1Q38SD2 2015 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 DSCR9P59020 149 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 GNG5P63218 68 aa12.43□□□□□ -0.42
UBR5-201ENST00000220959 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
UBR5-201ENST00000220959 NHLRC3Q5JS37 347 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 M0R2P5 195 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 OVOL1O14753 267 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 CELA3BP08861 270 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 TMEM8BA6NDV4 472 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 C4orf51C9J302 202 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 F2Z2F3 143 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 IFITM3Q01628 133 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 PSG8Q9UQ74 426 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 SAA2-SAA4A0A096LPE2 208 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 SAA2P0DJI9 122 aaPredicted RBP12.42□□□□□ -0.42
UBR5-201ENST00000220959 EPDR1Q9UM22 224 aa12.42□□□□□ -0.42
UBR5-201ENST00000220959 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
UBR5-201ENST00000220959 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
UBR5-201ENST00000220959 ATXN8Q156A1 80 aa12.41□□□□□ -0.42
UBR5-201ENST00000220959 MS4A6AQ9H2W1 248 aa12.41□□□□□ -0.42
UBR5-201ENST00000220959 LRP5O75197 1615 aa12.41□□□□□ -0.42
UBR5-201ENST00000220959 MED13LQ71F56 2210 aa12.41□□□□□ -0.42
UBR5-201ENST00000220959 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms