RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
SIX4-201ENST00000216513 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 RNF144BQ7Z419 303 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 NR2C2APQ86WQ0 139 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
SIX4-201ENST00000216513 IMMP2LQ96T52 175 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 MIEN1Q9BRT3 115 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 TBL2Q9Y4P3 447 aaKnown RBP11.34□□□□□ -0.59
SIX4-201ENST00000216513 J3QLI3 93 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 IFITM2Q01629 132 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 ZNF497Q6ZNH5 498 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 TNFRSF14Q92956 283 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 H1FOOQ8IZA3 346 aaPredicted RBP11.34□□□□□ -0.59
SIX4-201ENST00000216513 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 LINC00205P59089 165 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 ROS1P08922 2347 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 TP53BP1Q12888 1972 aaPredicted RBP11.34□□□□□ -0.59
SIX4-201ENST00000216513 BCL2P10415 239 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
SIX4-201ENST00000216513 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 GPR82Q96P67 336 aa11.34□□□□□ -0.59
SIX4-201ENST00000216513 SDHCQ99643 169 aaPredicted RBP11.33□□□□□ -0.6
SIX4-201ENST00000216513 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIX4-201ENST00000216513 GALNT14Q96FL9 552 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 HERPUD1Q15011 391 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 PRSS8Q16651 343 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 RAB24Q969Q5 203 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 RAMP3O60896 148 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 TRGV4A0A0C4DH28 118 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 PSPNO60542 156 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 MPDU1O75352 247 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 C8orf88P0DMB2 117 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 TAS2R60P59551 318 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 VGLL1Q99990 258 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 NABP2Q9BQ15 211 aa11.33□□□□□ -0.6
SIX4-201ENST00000216513 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 NMBP08949 121 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 IGFBP2P18065 325 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 TMEM187Q14656 261 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 RND3P61587 244 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
SIX4-201ENST00000216513 PSCAO43653 123 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 CD74P04233 296 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 CKS2P33552 79 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 FXYD7P58549 80 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 FAM209BQ5JX69 171 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 ELOA3CA0A087WX78 387 aaPredicted RBP11.32□□□□□ -0.6
SIX4-201ENST00000216513 M0R143 59 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 LYPD3O95274 346 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 CGAP01215 116 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 GNG5P63218 68 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
SIX4-201ENST00000216513 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 AGAP20933 346 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
SIX4-201ENST00000216513 A0A1W2PNU3 283 aaPredicted RBP11.31□□□□□ -0.6
SIX4-201ENST00000216513 M0R381 172 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 TM2D1Q9BX74 207 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 PROK2Q9HC23 129 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 HEATR5BQ9P2D3 2071 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 C7orf71A4D174 169 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 UPK2O00526 184 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 PPIFP30405 207 aaKnown RBP11.31□□□□□ -0.6
SIX4-201ENST00000216513 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
SIX4-201ENST00000216513 LOC107984156A0A0G2JMH3 177 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 ARL17AQ8IVW1 177 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
SIX4-201ENST00000216513 GFI1BQ5VTD9 330 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 NUDT3O95989 172 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
SIX4-201ENST00000216513 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
SIX4-201ENST00000216513 TNFRSF18Q9Y5U5 241 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 MPDZO75970 2070 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 PRTN3P24158 256 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 TMEM249Q2WGJ8 235 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
SIX4-201ENST00000216513 CBLN1P23435 193 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms