RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 GCHFRP30047 84 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 NHLRC3Q5JS37 347 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 ZNF324BQ6AW86 544 aaPredicted RBP9.38□□□□□ -0.91
PKP2-201ENST00000070846 GFI1Q99684 422 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 NPCDR1Q9BY65 106 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 DLX1P56177 255 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 DEFA6Q01524 100 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 TFF3Q07654 80 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 ZNF585BQ52M93 769 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 ZNF841Q6ZN19 808 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 TMEM144Q7Z5S9 345 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 SOD3P08294 240 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 MEOX2P50222 304 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 FOXL2NBQ6ZUU3 175 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 SDHCQ99643 169 aaPredicted RBP9.38□□□□□ -0.91
PKP2-201ENST00000070846 ZNF581Q9P0T4 197 aa9.38□□□□□ -0.91
PKP2-201ENST00000070846 TSC2P49815 1807 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 PRSS8Q16651 343 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 NAPSAO96009 420 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 CD55P08174 381 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 CD33P20138 364 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 CKS2P33552 79 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 PAX8Q06710 450 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 C2orf68Q2NKX9 166 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 Q6ZR03 302 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 RCC1LQ96I51 464 aaKnown RBP9.37□□□□□ -0.91
PKP2-201ENST00000070846 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 FRMPD3Q5JV73 1810 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 CGAP01215 116 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
PKP2-201ENST00000070846 LINC00205P59089 165 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 CBLN2Q8IUK8 224 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 STHQ8IWL8 128 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 DPH3Q96FX2 82 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 DUX3Q96PT4 197 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 LINC01587Q99440 93 aa9.37□□□□□ -0.91
PKP2-201ENST00000070846 B4DEV8 164 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 M0R381 172 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 FOSL1P15407 271 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 MPZP25189 248 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 ZNF56Q15929 161 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 LHFPL5Q8TAF8 219 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 HS3ST6Q96QI5 342 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 A0A0B4J293 547 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 CD8AP01732 235 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 FHL1Q13642 323 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 RNF212Q495C1 297 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 LCNL1Q6ZST4 164 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 KLHL30-AS1Q8NEE0 82 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 GGACTQ9BVM4 153 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 ZMAT5Q9UDW3 170 aaKnown RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 M0R2Z0 102 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 SNCGO76070 127 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 GATA3P23771 443 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 TEX38Q6PEX7 206 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 REG4Q9BYZ8 158 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 GGCTO75223 188 aaKnown RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 FAM3BP58499 235 aaPredicted RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 RELBQ01201 579 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 PMS2P11Q13670 270 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 SLC25A48Q6ZT89 311 aaKnown RBP9.36□□□□□ -0.91
PKP2-201ENST00000070846 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 ZNRD1Q9P1U0 126 aa9.36□□□□□ -0.91
PKP2-201ENST00000070846 HLA-DRB1P01911 266 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 CD99P14209 185 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 UBE2L6O14933 153 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 NMBP08949 121 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 Q6P435 159 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 IL17RELQ6ZVW7 336 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
PKP2-201ENST00000070846 RSPO3Q9BXY4 272 aaPredicted RBP9.35□□□□□ -0.91
PKP2-201ENST00000070846 BTF3P20290 206 aaKnown RBP9.35□□□□□ -0.91
PKP2-201ENST00000070846 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 NEU1Q99519 415 aa9.35□□□□□ -0.91
PKP2-201ENST00000070846 MUC21A0A0G2JKD1 596 aa9.34□□□□□ -0.91
PKP2-201ENST00000070846 MUC21A0A140T8X8 626 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms