RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 KIR2DS2P43631 304 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 NIT1Q86X76 327 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 C1orf174Q8IYL3 243 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF318Q5VUA4 2279 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 SRRM5B3KS81 715 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 HYPMO75409 117 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 MT-ND6P03923 174 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 SAMD13Q5VXD3 122 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 Q8N976 141 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 DEFB108BQ8NET1 73 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 DDB2Q92466 427 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF503Q96F45 646 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 SLC35D1Q9NTN3 355 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 CLCF1Q9UBD9 225 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 BMPR1BO00238 502 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 SPRY3O43610 288 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 KIR2DL2P43627 348 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 C9orf106Q8NAJ2 232 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 NEUROG1Q92886 237 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 LINC00479Q96M42 142 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 OR2V2Q96R30 315 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 CDC42EP3Q9UKI2 254 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 FOXA2Q9Y261 457 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 AMY1AP04745 511 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 USF1P22415 310 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 PRRX1P54821 245 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR31Q5SQ13 230 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 DUX4L9Q6RFH8 374 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 OR9G1Q8NH87 305 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF331Q9NQX6 463 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 COL6A6A6NMZ7 2263 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 SPTBN4Q9H254 2564 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 TRAV5A0A0B4J249 113 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 IGHV1-18A0A0C4DH31 117 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 F2RL2O00254 374 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 APCSP02743 223 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 SLC25A10Q9UBX3 287 aaPredicted RBP8.6□□□□□ -1.03
CX3CL1-201ENST00000006053 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 CORTO00230 105 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 OR10J3Q5JRS4 329 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 LCN12Q6JVE5 192 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM168AQ92567 244 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 PKDREJQ9NTG1 2253 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 GAGE12BA1L429 117 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 TAS2R45P59539 299 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 MZT1Q08AG7 82 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 SLAQ13239 276 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 C17orf58Q2M2W7 97 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 TSKUQ8WUA8 353 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 TMEM186Q96B77 213 aa8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 INTS1Q8N201 2190 aaKnown RBP8.59□□□□□ -1.03
CX3CL1-201ENST00000006053 ISLRO14498 428 aa8.59□□□□□ -1.04
CX3CL1-201ENST00000006053 IGLC2P0DOY2 106 aa8.59□□□□□ -1.04
CX3CL1-201ENST00000006053 IGLC3P0DOY3 106 aa8.59□□□□□ -1.04
CX3CL1-201ENST00000006053 CCL11P51671 97 aa8.59□□□□□ -1.04
CX3CL1-201ENST00000006053 RND1Q92730 232 aa8.59□□□□□ -1.04
CX3CL1-201ENST00000006053 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 IGLV2-8P01709 118 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 CTRLP40313 264 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 MORN5Q5VZ52 161 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 ITLN1Q8WWA0 313 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 PRNDQ9UKY0 176 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 IGHV3-48P01763 117 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 HES3Q5TGS1 186 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 MBNL2Q5VZF2 373 aaKnown RBP8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF355PQ9NSJ1 428 aa8.58□□□□□ -1.04
CX3CL1-201ENST00000006053 SRRM4A7MD48 611 aaKnown RBP8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 TOX4O94842 621 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 PPOXP50336 477 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 MFAP2P55001 183 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 STXBP6Q8NFX7 210 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 OR1N2Q8NGR9 330 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 AKAP6Q13023 2319 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 KBTBD11-OT1A0A1B0GTJ5 212 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 OR2T8A6NH00 312 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 HSBP1O75506 76 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 TSPOP30536 169 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 APOBEC3AP31941 199 aaPredicted RBP8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 GPR6P46095 362 aaPredicted RBP8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 COX19Q49B96 90 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 PRSS57Q6UWY2 283 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 OR2T6Q8NHC8 308 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms