RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	POU2AF1	Q16633	256 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	MALRD1	Q5VYJ5	2156 aa		13.65	□□□□□ -0.23
PHGDH-223	ENST00000641597	hADV38S2	A0JD32	116 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	PLAU	P00749	431 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	CA1	P00915	261 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	IER3	P46695	156 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	SUMO1	P63165	101 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	ABHD17A	Q96GS6	310 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	CGB1	A6NKQ9	187 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	C17orf100	A8MU93	164 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597		H0YJW9	148 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	GATC	O43716	136 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	WT1-AS	Q06250	92 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	TEX36	Q5VZQ5	186 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	OR8I2	Q8N0Y5	310 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	ADTRP	Q96IZ2	230 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	CTSZ	Q9UBR2	303 aa		13.64	□□□□□ -0.23
PHGDH-223	ENST00000641597	IGF2R	P11717	2491 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	PYY	P10082	97 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	TMEM108	Q6UXF1	575 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	TMEM18	Q96B42	140 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	LINC00574	Q9H8X3	128 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	LINC00312	Q9Y6C7	94 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	RNF224	P0DH78	156 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	ZNF833P	Q6ZTB9	187 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	CORO2A	Q92828	525 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	SAP30L	Q9HAJ7	183 aa		13.63	□□□□□ -0.23
PHGDH-223	ENST00000641597	HELT	A6NFD8	242 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597		A8MWP6	167 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	C16orf97	H3BN30	126 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	SCGB1D1	O95968	90 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	KIAA1644	Q3SXP7	199 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	MMD2	Q8IY49	270 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	ST6GALNAC3	Q8NDV1	305 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	ZNF714	Q96N38	554 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	COMMD5	Q9GZQ3	224 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	NCOR1P1	Q9H4R4	102 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597		V9GYV3	84 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	ARHGAP32	A7KAX9	2087 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	IGHV3-21	A0A0B4J1V1	117 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	GNG4	P50150	75 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	TCF15	Q12870	199 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	IL36B	Q9NZH7	164 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	ZNF257	Q9Y2Q1	563 aa		13.62	□□□□□ -0.23
PHGDH-223	ENST00000641597	CD69	Q07108	199 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	TDRG1	Q3Y452	100 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	REC114	Q7Z4M0	266 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	OR1L6	Q8NGR2	347 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	C11orf52	Q96A22	123 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	MISP3	Q96FF7	219 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	SGK494	Q96LW2	274 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	MRPL18	Q9H0U6	180 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	NDUFA4L2	Q9NRX3	87 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	PTPRQ	Q9UMZ3	2332 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	LYNX1	G3V0Z9	82 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	CRYAB	P02511	175 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	LYNX1	P0DP58	116 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	RPL8	P62917	257 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	IGF2-AS	Q6U949	168 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	OR10X1	Q8NGY0	326 aa		13.61	□□□□□ -0.23
PHGDH-223	ENST00000641597	PRB4	P10163	310 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	MGST1	P10620	155 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	AREG	P15514	252 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	C2orf83	Q53S99	150 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	BET1L	Q9NYM9	111 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	MED13L	Q71F56	2210 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	TRAV34	A0A0B4J273	112 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	NKX6-3	A6NJ46	265 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	FCN1	O00602	326 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	SLC25A17	O43808	307 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	SERF1A	O75920	110 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597		Q8NA96	180 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	NUP37	Q8NFH4	326 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	IGFBPL1	Q8WX77	278 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	FAM168A	Q92567	244 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	NPIPB3	Q92617	1050 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	FLYWCH2	Q96CP2	140 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	SLC25A33	Q9BSK2	321 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	RAB9B	Q9NP90	201 aa		13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	TECR	Q9NZ01	308 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-223	ENST00000641597	PPIAL4E	A0A075B759	164 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	SNURFL	B1AK76	121 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	PPIAL4D	F5H284	164 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	TMEM178B	H3BS89	294 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	PPIAL4F	P0DN26	164 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	TNFRSF1A	P19438	455 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	C3orf36	Q3SXR2	165 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	HCP5	Q6MZN7	132 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	FAM167A-AS1	Q96KT0	104 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	TXNDC17	Q9BRA2	123 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	SLC25A2	Q9BXI2	301 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	FKBP11	Q9NYL4	201 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	RNF114	Q9Y508	228 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	PPIAL4A	Q9Y536	164 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	IGLV2-8	P01709	118 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms