RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MRGPRG-AS1Q2M3A8 158 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 HLA-DRB5Q30154 266 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 ZNF114Q8NC26 417 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 OR2T6Q8NHC8 308 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 SRD5A3Q9H8P0 318 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 ABCA4P78363 2273 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 TRBV20OR9-2A0A075B6H5 130 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 PGPEP1LA6NFU8 196 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 IGLV1-47P01700 117 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 LGALS7P47929 136 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 IFITM10A6NMD0 228 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 CD99P14209 185 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 PRRX1P54821 245 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 PRB3Q04118 309 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-211ENST00000641213 PNKDQ8N490 385 aa13.76□□□□□ -0.21
PHGDH-211ENST00000641213 SPTBN4Q9H254 2564 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 OR5G3P0C626 314 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 RNASEH2CQ8TDP1 164 aaKnown RBP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 ACY3Q96HD9 319 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 TECRQ9NZ01 308 aaKnown RBP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 DCHS2Q6V1P9 2916 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 PPIAL4CA0A0B4J2A2 164 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 C1QTNF9P0C862 333 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 PPIAL4GP0DN37 164 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 SUB1P53999 127 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHGDH-211ENST00000641213 PSG5Q15238 335 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 ZNF503Q96F45 646 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
PHGDH-211ENST00000641213 ATRXP46100 2492 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 A0A1W2PPI3 338 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 A0A1W2PPQ1 181 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 BUB1B-PAK6H3BSN5 160 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 AREGP15514 252 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-211ENST00000641213 OR2T10Q8NGZ9 312 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 C11orf52Q96A22 123 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 TMEM167BQ9NRX6 74 aa13.74□□□□□ -0.21
PHGDH-211ENST00000641213 TPRP12270 2363 aaKnown RBP13.74□□□□□ -0.21
PHGDH-211ENST00000641213 TEX45Q8NA69 505 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 BEND2Q8NDZ0 799 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 C8orf46Q8TAG6 207 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 UHRF2Q96PU4 802 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 ARL2-SNX15V9GYD0 113 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 RELNP78509 3460 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 IGHV1-3A0A0C4DH29 117 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 PSMB11A5LHX3 300 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 PPP5D1E7EU14 171 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 RBP4P02753 201 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 CNTFRP26992 372 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 GFI1BQ5VTD9 330 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 PQLC2Q6ZP29 291 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
PHGDH-211ENST00000641213 PPP1R2P9O14990 202 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 LY6HO94772 140 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 REG1AP05451 166 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 CRYGBP07316 175 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 SOD3P08294 240 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 KCNIP4Q6PIL6 250 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 OR8B3Q8NGG8 313 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 OR8B2Q96RD0 313 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 INSIG2Q9Y5U4 225 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 ARHGAP32A7KAX9 2087 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 ZZEF1O43149 2961 aa13.72□□□□□ -0.21
PHGDH-211ENST00000641213 HRNRQ86YZ3 2850 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-211ENST00000641213 ELOA3CA0A087WX78 387 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-211ENST00000641213 OR7C2O60412 319 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 TAS2R45P59539 299 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 PRSS8Q16651 343 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 MMD2Q8IY49 270 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 NPIPB3Q92617 1050 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 RAB1BQ9H0U4 201 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 MIOXQ9UGB7 285 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 MDFIC2A0A1B0GVS7 189 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 IGLC7A0M8Q6 106 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 IGHV3-48P01763 117 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 HNF1AP20823 631 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 COX7A1P24310 79 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 FAM3BP58499 235 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-211ENST00000641213 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.21
PHGDH-211ENST00000641213 GAR1Q9NY12 217 aaKnown RBP13.71□□□□□ -0.21
PHGDH-211ENST00000641213 MRPL36Q9P0J6 103 aaKnown RBP13.71□□□□□ -0.21
PHGDH-211ENST00000641213 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 TYMSP04818 313 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 C8orf88P0DMB2 117 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 TNXAQ16473 311 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 THAP8Q8NA92 274 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 IMMP2LQ96T52 175 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 MRPL32Q9BYC8 188 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms