RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PRR20CP86479 221 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 PRR20DP86480 221 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 PRR20BP86481 221 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 PRR20AP86496 221 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 CLRN3Q8NCR9 226 aa13.81□□□□□ -0.2
PHGDH-208ENST00000641023 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
PHGDH-208ENST00000641023 ASH1LQ9NR48 2969 aaKnown RBP13.8□□□□□ -0.2
PHGDH-208ENST00000641023 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 DEFA4P12838 97 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 NPBWR1P48145 328 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 DSCR9P59020 149 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 OR1P1Q8NH06 330 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 SLC45A2Q9UMX9 530 aa13.8□□□□□ -0.2
PHGDH-208ENST00000641023 TEX22C9J3V5 150 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 CORTO00230 105 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 AREGP15514 252 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 PSMB3P49720 205 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 CEBPGP53567 150 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 EBI3Q14213 229 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 TMEM249Q2WGJ8 235 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 OR2T6Q8NHC8 308 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 ACY3Q96HD9 319 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 TMPRSS5Q9H3S3 457 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 MANBALQ9NQG1 85 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 IGHV4-30-2A0A087WSY4 118 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 PLXNB1O43157 2135 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 APELAP0DMC3 54 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 PAX1P15863 534 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 OR10J1P30954 320 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 PAX8Q06710 450 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 CYB561D1Q8N8Q1 229 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 C17orf50Q8WW18 174 aa13.79□□□□□ -0.2
PHGDH-208ENST00000641023 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-208ENST00000641023 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
PHGDH-208ENST00000641023 FBP1P09467 338 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 BRS3P32247 399 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 RHOBP62745 196 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-208ENST00000641023 C5orf64Q2M2E5 130 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 SPG11Q96JI7 2443 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 DNASE2O00115 360 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-208ENST00000641023 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
PHGDH-208ENST00000641023 LINC00869P0C866 280 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 SAA4P35542 130 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 MISP3Q96FF7 219 aa13.78□□□□□ -0.2
PHGDH-208ENST00000641023 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
PHGDH-208ENST00000641023 NCBP2LA6PVI3 153 aaKnown RBP13.77□□□□□ -0.21
PHGDH-208ENST00000641023 MT-CO2P00403 227 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 STAG3L2P0CL84 134 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 STAG3L3P0CL85 134 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 MEF2BQ02080 365 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-208ENST00000641023 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 C22orf15Q8WYQ4 148 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 NRGNQ92686 78 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 C19orf24Q9BVV8 132 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 LRRK2Q5S007 2527 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 NAV3Q8IVL0 2385 aa13.77□□□□□ -0.21
PHGDH-208ENST00000641023 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 M0R036 132 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 TSPAN9O75954 239 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 TMEM11P17152 192 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 FXYD3Q14802 87 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 Q8N6K4 173 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 ABHD5Q8WTS1 349 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 SEPSECSQ9HD40 501 aaKnown RBP13.76□□□□□ -0.21
PHGDH-208ENST00000641023 UTP20O75691 2785 aaKnown RBP13.76□□□□□ -0.21
PHGDH-208ENST00000641023 FAM74A7A6NL05 159 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 NPFFO15130 113 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 CXorf1O96002 111 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 FAM74A3Q4VXF1 159 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 C1RLQ9NZP8 487 aa13.76□□□□□ -0.21
PHGDH-208ENST00000641023 PUS1Q9Y606 427 aaKnown RBP eCLIP13.76□□□□□ -0.21
PHGDH-208ENST00000641023 CRYGCP07315 174 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 MFAP2P55001 183 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 AWAT1Q58HT5 328 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 TMEM88Q6PEY1 159 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 ZNF562Q6V9R5 426 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 CYP2G1PQ6ZSU1 146 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 NIPSNAP3BQ9BS92 247 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 TSPAN4O14817 238 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 GATA2P23769 480 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-208ENST00000641023 RND2P52198 227 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 AKIRIN2Q53H80 203 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 SPNS3Q6ZMD2 512 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 THAP8Q8NA92 274 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 OR1L6Q8NGR2 347 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 AJUBAQ96IF1 538 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 SLC25A33Q9BSK2 321 aa13.75□□□□□ -0.21
PHGDH-208ENST00000641023 H3BQ15 152 aa13.74□□□□□ -0.21
PHGDH-208ENST00000641023 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms