RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
GFAP-237ENST00000640552 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
GFAP-237ENST00000640552 TRAV20A0A0B4J274 112 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 H0YJW9 148 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 UBE2CO00762 179 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 MPDU1O75352 247 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 UBE2L3P68036 154 aaKnown RBP11.39□□□□□ -0.59
GFAP-237ENST00000640552 PNKDQ8N490 385 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 ZNF439Q8NDP4 499 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 OR1B1Q8NGR6 318 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 PFDN5Q99471 154 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 FAM103A1Q9BTL3 118 aaKnown RBP11.39□□□□□ -0.59
GFAP-237ENST00000640552 LPAR2Q9HBW0 351 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 OR4X1Q8NH49 305 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 FBXL15Q9H469 300 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
GFAP-237ENST00000640552 FCN3O75636 299 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 PYYP10082 97 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 LOXP28300 417 aaPredicted RBP11.39□□□□□ -0.59
GFAP-237ENST00000640552 TMPRSS3P57727 454 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 KDF1Q8NAX2 398 aaPredicted RBP11.39□□□□□ -0.59
GFAP-237ENST00000640552 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 DIRC2Q96SL1 478 aa11.39□□□□□ -0.59
GFAP-237ENST00000640552 IGKV1OR2-108A0A075B7D4 117 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 PPIAL4CA0A0B4J2A2 164 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 A0A1B0GUS0 222 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 RANP62826 216 aaKnown RBP11.38□□□□□ -0.59
GFAP-237ENST00000640552 TRAV34A0A0B4J273 112 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 IMMP2LQ96T52 175 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 KCNIP2Q9NS61 270 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 PDE6DO43924 150 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 NUBP1P53384 320 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
GFAP-237ENST00000640552 OR5AU1Q8NGC0 362 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 LINC00479Q96M42 142 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 FKBP11Q9NYL4 201 aa11.38□□□□□ -0.59
GFAP-237ENST00000640552 STAG3L2P0CL84 134 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 STAG3L3P0CL85 134 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 LINC00587B1AMM8 73 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 IGHV1-8P0DP01 117 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 CDKN1AP38936 164 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 MRPL41Q8IXM3 137 aaKnown RBP11.37□□□□□ -0.59
GFAP-237ENST00000640552 CORO2AQ92828 525 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 TCEAL7Q9BRU2 100 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 LY86O95711 162 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 AREGP15514 252 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 KLRD1Q13241 179 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
GFAP-237ENST00000640552 RBP4P02753 201 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 IL3RAP26951 378 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 CDX1P47902 265 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 GNG4P50150 75 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 PPOXP50336 477 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 OR10G8Q8NGN5 311 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 OSR1Q8TAX0 266 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 FLNCQ14315 2725 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 NOTCH3Q9UM47 2321 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 TRBV20OR9-2A0A075B6H5 130 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 HELTA6NFD8 242 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 B9A039 149 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 PHOX2AO14813 284 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 IGHV2-5P01817 119 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 MMDQ15546 238 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 MORN5Q5VZ52 161 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 Q8N7P7 452 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 NCBP2LA6PVI3 153 aaKnown RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 NDUFS7O75251 213 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 CA1P00915 261 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 HOXA5P20719 270 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
GFAP-237ENST00000640552 SSX2Q16385 188 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 CR1LQ2VPA4 569 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 ZNF672Q499Z4 452 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
GFAP-237ENST00000640552 PACRGQ96M98 296 aaPredicted RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 RNASE7Q9H1E1 156 aaKnown RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 TECRQ9NZ01 308 aaKnown RBP11.36□□□□□ -0.59
GFAP-237ENST00000640552 SETD2Q9BYW2 2564 aaPredicted RBP11.35□□□□□ -0.59
GFAP-237ENST00000640552 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
GFAP-237ENST00000640552 CBLN1P23435 193 aa11.35□□□□□ -0.59
GFAP-237ENST00000640552 SFRP2Q96HF1 295 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms