RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 LINC01619G3V211 115 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 K7EIM0 57 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 CYB5BO43169 146 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 SYNGR2O43760 224 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 SIX6O95475 246 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 SCGB1D2O95969 90 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 HSPB1P04792 205 aaKnown RBP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 NKX2-1P43699 371 aaPredicted RBP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 SLURP1P55000 103 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 POLR2GP62487 172 aaKnown RBP eCLIP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 ID3Q02535 119 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 ZNF616Q08AN1 781 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 OXA1LQ15070 435 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 SLC24A4Q8NFF2 622 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 PINX1Q96BK5 328 aaKnown RBP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 PEF1Q9UBV8 284 aaKnown RBP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 ALG5Q9Y673 324 aa10.17□□□□□ -0.78
GTF3A-209ENST00000640289 C7orf66A4D0T2 115 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 PPP5D1E7EU14 171 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 I3L2K1 104 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 WRBO00258 174 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 GOSR2O14653 212 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 MT-CO2P00403 227 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 IFNA10P01566 189 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 IGHV3-48P01763 117 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 HTR2BP41595 481 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
GTF3A-209ENST00000640289 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 PVRIGQ6DKI7 326 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 GSG1LQ6UXU4 331 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 ZNF502Q8TBZ5 544 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 SCARB1Q8WTV0 552 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 DPF1Q92782 380 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 CXorf58Q96LI9 332 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 RANGRFQ9HD47 186 aaPredicted RBP10.16□□□□□ -0.78
GTF3A-209ENST00000640289 ZC4H2Q9NQZ6 224 aa10.16□□□□□ -0.78
GTF3A-209ENST00000640289 TRBV7-1A0A0A6YYK4 115 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 BMPR1BO00238 502 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 SSNA1O43805 119 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 MED6O75586 246 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 NPY1RP25929 384 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 HOXD3P31249 432 aaPredicted RBP10.15□□□□□ -0.78
GTF3A-209ENST00000640289 MLANAQ16655 118 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 VN1R17PQ8TDU5 208 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
GTF3A-209ENST00000640289 C2orf50Q96LR7 162 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 FNDC4Q9H6D8 234 aaPredicted RBP10.15□□□□□ -0.78
GTF3A-209ENST00000640289 C21orf62Q9NYP8 219 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 U3KQ87 197 aa10.15□□□□□ -0.78
GTF3A-209ENST00000640289 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
GTF3A-209ENST00000640289 SSSCA1O60232 199 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 MBPP02686 304 aaPredicted RBP10.14□□□□□ -0.79
GTF3A-209ENST00000640289 CLEC3BP05452 202 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 OR8U8P0C7N1 319 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 CD33P20138 364 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 GPR183P32249 361 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 ARL3P36405 182 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 UBAC2Q8NBM4 344 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 DCUN1D4Q92564 292 aa10.14□□□□□ -0.79
GTF3A-209ENST00000640289 WDR89Q96FK6 387 aaPredicted RBP10.14□□□□□ -0.79
GTF3A-209ENST00000640289 PAIP2BQ9ULR5 123 aaKnown RBP10.14□□□□□ -0.79
GTF3A-209ENST00000640289 RCL1Q9Y2P8 373 aaKnown RBP10.14□□□□□ -0.79
GTF3A-209ENST00000640289 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 C15orf62A8K5M9 175 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 H3BP45 60 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 CORTO00230 105 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 TMEM50AO95807 157 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 OPRK1P41145 380 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 IL15RAQ13261 267 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 RPEL1Q2QD12 228 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 Q56UQ5 140 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 WFDC9Q8NEX5 89 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 CIB3Q96Q77 187 aaPredicted RBP10.13□□□□□ -0.79
GTF3A-209ENST00000640289 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 MRPL36Q9P0J6 103 aaKnown RBP10.13□□□□□ -0.79
GTF3A-209ENST00000640289 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
GTF3A-209ENST00000640289 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
GTF3A-209ENST00000640289 IGHV3-35A0A0C4DH35 117 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 K7EPK0 472 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 OR2C1O95371 312 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 IGLL1P15814 213 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 ZP3P21754 424 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 MFAP4P55083 255 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 PAX9P55771 341 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 H2BFSP57053 126 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 RAB32Q13637 225 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 ACSM6Q6P461 480 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 CHRDL1Q9BU40 450 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 PSENENQ9NZ42 101 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 MGAT4CQ9UBM8 478 aa10.12□□□□□ -0.79
GTF3A-209ENST00000640289 OVOL1O14753 267 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 TGOLN2O43493 480 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 GGCTO75223 188 aaKnown RBP10.11□□□□□ -0.79
GTF3A-209ENST00000640289 IFNA4P05014 189 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 ADMP35318 185 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms