RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 FKBP11Q9NYL4 201 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 SSR3Q9UNL2 185 aa10.9□□□□□ -0.66
SYNE2-228ENST00000639659 PMP2P02689 132 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 SDC2P34741 201 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 RFX2P48378 723 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 PHLDA2Q53GA4 152 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 CMTM1Q8IZ96 169 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 HRH4Q9H3N8 390 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 DIABLOQ9NR28 239 aa10.89□□□□□ -0.67
SYNE2-228ENST00000639659 AGRNO00468 2067 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 ELOA3CA0A087WX78 387 aaPredicted RBP10.88□□□□□ -0.67
SYNE2-228ENST00000639659 A0A1B0GVY2 172 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 MIFP14174 115 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 C4BPBP20851 252 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
SYNE2-228ENST00000639659 CBX5P45973 191 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 PVRIGQ6DKI7 326 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 IZUMO2Q6UXV1 221 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 TSC22D3Q99576 134 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 TXN2Q99757 166 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 FXYD6Q9H0Q3 95 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 RNF167Q9H6Y7 350 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 CELA1Q9UNI1 258 aa10.88□□□□□ -0.67
SYNE2-228ENST00000639659 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYNE2-228ENST00000639659 DEFB131BA0A096LNP1 70 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 LOC100506127A0A0U1RQW1 187 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 CD5P06127 495 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 ACTL10Q5JWF8 245 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 UBE2UQ5VVX9 321 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 TMEM231Q9H6L2 316 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 TMEM14BQ9NUH8 114 aa10.87□□□□□ -0.67
SYNE2-228ENST00000639659 GPR31O00270 319 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
SYNE2-228ENST00000639659 NPBWR1P48145 328 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 ZNF600Q6ZNG1 722 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
SYNE2-228ENST00000639659 RNF126Q9BV68 326 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 X6R8D5 127 aa10.86□□□□□ -0.67
SYNE2-228ENST00000639659 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 MUC4Q99102 2169 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 A6NJ64 397 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 RTL8CO15255 209 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 P0DMU3 169 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 SPP1P10451 314 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
SYNE2-228ENST00000639659 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
SYNE2-228ENST00000639659 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 POM121L12Q8N7R1 296 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 SCRT1Q9BWW7 348 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 VCX3BQ9H321 246 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
SYNE2-228ENST00000639659 IGLV2-18A0A075B6J9 118 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 A0A1B0GU03 582 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 AMBPP02760 352 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 NPPCP23582 126 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 S100GP29377 79 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 HSPA13P48723 471 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 PPP5CP53041 499 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 SCAND1P57086 179 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 GABARAPL2P60520 117 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 TMEM41BQ5BJD5 291 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 MRGPRFQ96AM1 343 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
SYNE2-228ENST00000639659 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 DNAH2Q9P225 4427 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 A0A1W2PS18 150 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 ZNF705EA8MWA4 302 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-228ENST00000639659 K7EQG2 157 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 SNCAP37840 140 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 P2RY1P47900 373 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 TAS2R46P59540 309 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 IZUMO4Q1ZYL8 232 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 C12orf74Q32Q52 190 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 DHRS11Q6UWP2 260 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 TBC1D26Q86UD7 250 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 SPARTQ8N0X7 666 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 SLC35G3Q8N808 338 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 ZNF114Q8NC26 417 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 OR6F1Q8NGZ6 308 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.68
SYNE2-228ENST00000639659 METTL26Q96S19 204 aa10.83□□□□□ -0.68
SYNE2-228ENST00000639659 IFNA10P01566 189 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
SYNE2-228ENST00000639659 HRH1P35367 487 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms