RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 C21orf62Q9NYP8 219 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 ZNF497Q6ZNH5 498 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 SFTPCP11686 197 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 UCNP55089 124 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 CD69Q07108 199 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 SAMD13Q5VXD3 122 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 FAM169BQ8N8A8 192 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 LINC01560Q8TB33 94 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 REG4Q9BYZ8 158 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 C15orf61A6NNL5 157 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-213ENST00000638680 UPK2O00526 184 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 TFF1P04155 84 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 NRXN2Q9P2S2 1712 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 OR10J3Q5JRS4 329 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 OSTCQ9NRP0 149 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 TNFRSF18Q9Y5U5 241 aa15.47■□□□□ 0.07
SCARB2-213ENST00000638680 LINC00271P0C7V0 271 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 PYYP10082 97 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 NUDT11Q96G61 164 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 LINC00614P0C842 121 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 APOBEC3AP31941 199 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-213ENST00000638680 DPM3Q9P2X0 92 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 GNB1LQ9BYB4 327 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 MEGF9Q9H1U4 602 aa15.46■□□□□ 0.07
SCARB2-213ENST00000638680 KNTC1P50748 2209 aa15.46■□□□□ 0.06
SCARB2-213ENST00000638680 TAF1LQ8IZX4 1826 aa15.46■□□□□ 0.06
SCARB2-213ENST00000638680 TDRD6O60522 2096 aaKnown RBP15.45■□□□□ 0.06
SCARB2-213ENST00000638680 TMEM50AO95807 157 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 RNASE4P34096 147 aaKnown RBP15.45■□□□□ 0.06
SCARB2-213ENST00000638680 ARPC1AQ92747 370 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 DMRTA2Q96SC8 542 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 NHP2Q9NX24 153 aaKnown RBP15.45■□□□□ 0.06
SCARB2-213ENST00000638680 EPDR1Q9UM22 224 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 AMBPP02760 352 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 OR9G9P0C7N8 305 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 TEX38Q6PEX7 206 aa15.45■□□□□ 0.06
SCARB2-213ENST00000638680 FAM90A1Q86YD7 464 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 LINC00312Q9Y6C7 94 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 EFNB3Q15768 340 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 H7C1H1 209 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 YPEL1O60688 119 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 TMPRSS3P57727 454 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 FAM71F2Q6NXP2 309 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 CLEC19AQ6UXS0 136 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 PPP1R27Q86WC6 154 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 YPEL2Q96QA6 119 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 PATJQ8NI35 1801 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 MORN2Q502X0 79 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 C1orf162Q8NEQ5 155 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-213ENST00000638680 TMEM242Q9NWH2 141 aa15.44■□□□□ 0.06
SCARB2-213ENST00000638680 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
SCARB2-213ENST00000638680 FLVCR1-AS1Q8TAF5 88 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 PSMG4Q5JS54 123 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 SFTA2Q6UW10 78 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 SEMA5BQ9P283 1151 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 TMEM262E9PQX1 116 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 STAG3L3P0CL85 134 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 ZNF124Q15973 351 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 IMMP1LQ96LU5 166 aa15.43■□□□□ 0.06
SCARB2-213ENST00000638680 SP9P0CG40 484 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 RIPPLY3P57055 190 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 OR4X2Q8NGF9 303 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 MYOFQ9NZM1 2061 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 TRBV24-1A0A075B6N3 115 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 CCL3L1P16619 93 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 SUPT4H1P63272 117 aaKnown RBP15.42■□□□□ 0.06
SCARB2-213ENST00000638680 BSPH1Q075Z2 132 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 C2orf88Q9BSF0 95 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 ZNF257Q9Y2Q1 563 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 CENPVQ7Z7K6 275 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-213ENST00000638680 RTN4RL2Q86UN3 420 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 HBDP02042 147 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 Q5PR19 223 aa15.42■□□□□ 0.06
SCARB2-213ENST00000638680 A0A1W2PRE2 83 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 PDLIM4P50479 330 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 PRB3Q04118 309 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-213ENST00000638680 TMEM101Q96IK0 257 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 PRR19A6NJB7 356 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 EFEMP2O95967 443 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 UMODP07911 640 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 COQ2Q96H96 371 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 CEACAM1P13688 526 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 OR5A1Q8NGJ0 315 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 PTPRZ1P23471 2315 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-213ENST00000638680 TCRBV4S1A1TA0A5B7 111 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 FOXH1O75593 365 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 ATP5J2P56134 94 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 VWCEQ96DN2 955 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 HAX1O00165 279 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 LHX2P50458 406 aa15.41■□□□□ 0.06
SCARB2-213ENST00000638680 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-213ENST00000638680 COX6B1P14854 86 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 LDLRAD2Q5SZI1 272 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 LHFPL1Q86WI0 220 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 IGKV1-12A0A0C4DH73 117 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 IGKV1D-12P01611 117 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 CACNG7P62955 275 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms