RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TEX13DA0A0J9YY54 714 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 I3L2K1 104 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 NDUFA4O00483 81 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 ST8SIA3O43173 380 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 B3GALNT1O75752 331 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 MT-CO2P00403 227 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 MFAP4P55083 255 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 SURF2Q15527 256 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 MCFD2Q8NI22 146 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 PINX1Q96BK5 328 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 CITED4Q96RK1 184 aa12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 RTBDNQ9BSG5 229 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-259ENST00000638114 TRAV25A0A0B4J276 109 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 ZNF207O43670 478 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 CTSGP08311 255 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 OR5AC1P0C628 307 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 TNFSF8P32971 234 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 SNCAP37840 140 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 OR51S1Q8NGJ8 323 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 PRRT1Q99946 306 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 TMEM222Q9H0R3 208 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 C5orf66Q9H5L9 145 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 NAA60Q9H7X0 242 aa12.57□□□□□ -0.4
CACNA1A-259ENST00000638114 A0A0G2JRQ6 117 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 ANKRD20A5PA0PJZ0 165 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 FABP12A6NFH5 140 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 CCDC160A6NGH7 325 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 ETV6P41212 452 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 RELQ04864 619 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 LINC00322Q6ZN03 302 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 TXN2Q99757 166 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 ENY2Q9NPA8 101 aa12.56□□□□□ -0.4
CACNA1A-259ENST00000638114 GNG7O60262 68 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 YIF1AO95070 293 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 CDS2O95674 445 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 FCGR2BP31994 310 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 RETNQ9HD89 108 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
CACNA1A-259ENST00000638114 CRYM-AS1A6NIL9 109 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 C15orf62A8K5M9 175 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 INS-IGF2F8WCM5 200 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 K7EMT4 169 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 DHODHQ02127 395 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 LAMTOR1Q6IAA8 161 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 SOSTQ9BQB4 213 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
CACNA1A-259ENST00000638114 TSPAN4O14817 238 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 LYL1P12980 280 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 CASC10Q5T4H9 136 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 Q6ZRM9 215 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
CACNA1A-259ENST00000638114 CORTO00230 105 aa12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 ZNF414Q96IQ9 312 aa12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 CACNG5Q9UF02 275 aa12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 SMPXQ9UHP9 88 aa12.52□□□□□ -0.41
CACNA1A-259ENST00000638114 IGHV3-49A0A0A0MS15 119 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 SPCS3P61009 180 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 OR10C1Q96KK4 312 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 UBQLN2Q9UHD9 624 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
CACNA1A-259ENST00000638114 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 OR4C46A6NHA9 309 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 AKR1C4P17516 323 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 S100A5P33763 92 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 FAUP35544 74 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 OPRK1P41145 380 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 ZFAND6Q6FIF0 208 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 OR52E5Q8NH55 327 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 TMEM230Q96A57 120 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms