RNA–Protein interactions for RNA: ENST00000637985.1

CLN3-264, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-264ENST00000637985 M0QYG6 137 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 TBPP20226 339 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 MFAP2P55001 183 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 RND3P61587 244 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 RNASE10Q5GAN6 216 aaKnown RBP11.99□□□□□ -0.49
CLN3-264ENST00000637985 H2BFWTQ7Z2G1 175 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 LHFPL1Q86WI0 220 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 ARRDC1Q8N5I2 433 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 OR4A16Q8NH70 328 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 MRPS26Q9BYN8 205 aaKnown RBP11.99□□□□□ -0.49
CLN3-264ENST00000637985 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
CLN3-264ENST00000637985 OR2T8A6NH00 312 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 DBX1A6NMT0 343 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 IGKV1-39P01597 117 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 IGKV1D-39P04432 117 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 BTNL8Q6UX41 500 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 OR52I2Q8NH67 350 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 SCARB1Q8WTV0 552 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 TMEM190Q8WZ59 177 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 C21orf62Q9NYP8 219 aa11.98□□□□□ -0.49
CLN3-264ENST00000637985 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 K7EIM0 57 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 NDUFA4O00483 81 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 CD3DP04234 171 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 PGAM2P15259 253 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 ALDH3B2P48448 385 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 RNASE12Q5GAN4 147 aaKnown RBP11.97□□□□□ -0.49
CLN3-264ENST00000637985 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
CLN3-264ENST00000637985 GPR141Q7Z602 305 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
CLN3-264ENST00000637985 C5orf66Q9H5L9 145 aa11.97□□□□□ -0.49
CLN3-264ENST00000637985 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
CLN3-264ENST00000637985 FCGR2BP31994 310 aaPredicted RBP11.96□□□□□ -0.49
CLN3-264ENST00000637985 PIGPP57054 158 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.49
CLN3-264ENST00000637985 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 OR2C3Q8N628 320 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 TMEM229BQ8NBD8 167 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 ZNF114Q8NC26 417 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 MAP6D1Q9H9H5 199 aa11.96□□□□□ -0.49
CLN3-264ENST00000637985 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
CLN3-264ENST00000637985 IGHV3-21A0A0B4J1V1 117 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
CLN3-264ENST00000637985 GABARAPH6UMI1 98 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 ATG12O94817 140 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 CD74P04233 296 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 TAS2R19P59542 299 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
CLN3-264ENST00000637985 SSBP1Q04837 148 aaKnown RBP11.95□□□□□ -0.5
CLN3-264ENST00000637985 Q56UQ5 140 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 TERB2Q8NHR7 220 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 ZFAND1Q8TCF1 268 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 TXN2Q99757 166 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 RARRES2Q99969 163 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 CHRDL1Q9BU40 450 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 UBQLN2Q9UHD9 624 aa11.95□□□□□ -0.5
CLN3-264ENST00000637985 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 K7EMT4 169 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 RGS5O15539 181 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 CDK2AP2O75956 126 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
CLN3-264ENST00000637985 PI3P19957 117 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 ADMP35318 185 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 ERHP84090 104 aaKnown RBP11.94□□□□□ -0.5
CLN3-264ENST00000637985 CCDC71LQ8N9Z2 235 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 UBAC2Q8NBM4 344 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
CLN3-264ENST00000637985 MIXL1Q9H2W2 232 aa11.94□□□□□ -0.5
CLN3-264ENST00000637985 C3orf85A0A1B0GTC6 90 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 I3L2K1 104 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 TSPAN4O14817 238 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 NUPL2O15504 423 aaKnown RBP11.93□□□□□ -0.5
CLN3-264ENST00000637985 B3GALNT1O75752 331 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 RAB3DO95716 219 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 CTSGP08311 255 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 MFAP4P55083 255 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 RELQ04864 619 aaPredicted RBP11.93□□□□□ -0.5
CLN3-264ENST00000637985 LAMTOR1Q6IAA8 161 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 STEAP1BQ6NZ63 245 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 TP53RKQ96S44 253 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 COPZ2Q9P299 210 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 RABL2AQ9UBK7 228 aaPredicted RBP11.93□□□□□ -0.5
CLN3-264ENST00000637985 RABL2BQ9UNT1 228 aa11.93□□□□□ -0.5
CLN3-264ENST00000637985 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 IGKV1-5P01602 117 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 P0C879 139 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 AKR1C2P52895 323 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 PPP5CP53041 499 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 MEF2DQ14814 521 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 SPCS2Q15005 226 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 OR4D10Q8NGI6 311 aa11.92□□□□□ -0.5
CLN3-264ENST00000637985 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms