RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
CLN6-220ENST00000637450 ZNF124Q15973 351 aa13.6□□□□□ -0.23
CLN6-220ENST00000637450 TMEM217Q8N7C4 229 aa13.6□□□□□ -0.23
CLN6-220ENST00000637450 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
CLN6-220ENST00000637450 GNG7O60262 68 aa13.59□□□□□ -0.23
CLN6-220ENST00000637450 TNFAIP8O95379 198 aa13.59□□□□□ -0.23
CLN6-220ENST00000637450 TFPI2P48307 235 aa13.59□□□□□ -0.23
CLN6-220ENST00000637450 VBP1P61758 197 aa13.59□□□□□ -0.23
CLN6-220ENST00000637450 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
CLN6-220ENST00000637450 FUNDC2Q9BWH2 189 aa13.59□□□□□ -0.23
CLN6-220ENST00000637450 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
CLN6-220ENST00000637450 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 IGHV3OR16-13A0A075B7E8 117 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 IGHV3-74A0A0B4J1X5 117 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 M0QYG6 137 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 HPGDSO60760 199 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 RND3P61587 244 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 IZUMO4Q1ZYL8 232 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.24
CLN6-220ENST00000637450 A0A0B4J293 547 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 MPTX1A8MV57 137 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 INS-IGF2F8WCM5 200 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 IGKV1-5P01602 117 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 CD5P06127 495 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 P0C879 139 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 NPBWR1P48145 328 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 LILRB2Q8N423 598 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 DUSP18Q8NEJ0 188 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 GATAD1Q8WUU5 269 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
CLN6-220ENST00000637450 GINS3Q9BRX5 216 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 VSIRQ9H7M9 311 aa13.57□□□□□ -0.24
CLN6-220ENST00000637450 SNCAP37840 140 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 SPINK9Q5DT21 86 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 PVRIGQ6DKI7 326 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 TCF24Q7RTU0 167 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 LHFPL1Q86WI0 220 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
CLN6-220ENST00000637450 ST8SIA2Q92186 375 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 RARRES2Q99969 163 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
CLN6-220ENST00000637450 TMEM50AO95807 157 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 APOHP02749 345 aaPredicted RBP13.55□□□□□ -0.24
CLN6-220ENST00000637450 PGAM2P15259 253 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 PI3P19957 117 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 RORCP51449 518 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 PIGPP57054 158 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 ZNF600Q6ZNG1 722 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
CLN6-220ENST00000637450 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
CLN6-220ENST00000637450 DFFBO76075 338 aa13.54□□□□□ -0.24
CLN6-220ENST00000637450 CD3DP04234 171 aa13.54□□□□□ -0.24
CLN6-220ENST00000637450 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
CLN6-220ENST00000637450 MS4A6AQ9H2W1 248 aa13.54□□□□□ -0.24
CLN6-220ENST00000637450 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLN6-220ENST00000637450 C3orf85A0A1B0GTC6 90 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 FAM25AB3EWG3 89 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 FAM25CB3EWG5 89 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 FAM25GB3EWG6 89 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 DNASE2O00115 360 aaPredicted RBP13.53□□□□□ -0.24
CLN6-220ENST00000637450 ATG12O94817 140 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 IFNA17P01571 189 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
CLN6-220ENST00000637450 MZT2AQ6P582 158 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 ARRDC1Q8N5I2 433 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 SLC35G3Q8N808 338 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 OR11H2Q8NH07 326 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 OR52I2Q8NH67 350 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 MTFP1Q9UDX5 166 aa13.53□□□□□ -0.24
CLN6-220ENST00000637450 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 IGHV3-66A0A0C4DH42 116 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 A0A1B0GU03 582 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 RNASE2P10153 161 aaKnown RBP13.52□□□□□ -0.25
CLN6-220ENST00000637450 TBPP20226 339 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 ETV6P41212 452 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 AKR1C2P52895 323 aa13.52□□□□□ -0.25
CLN6-220ENST00000637450 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLN6-220ENST00000637450 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
CLN6-220ENST00000637450 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 CORTO00230 105 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 DEFB131AP59861 70 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 SP6Q3SY56 376 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 TERB2Q8NHR7 220 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 ZFAND1Q8TCF1 268 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 AP3S1Q92572 193 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 ABHD1Q96SE0 405 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 PDCD10Q9BUL8 212 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
CLN6-220ENST00000637450 CLN5O75503 358 aa13.5□□□□□ -0.25
CLN6-220ENST00000637450 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
CLN6-220ENST00000637450 NPPCP23582 126 aa13.5□□□□□ -0.25
CLN6-220ENST00000637450 RPL5P46777 297 aaKnown RBP13.5□□□□□ -0.25
CLN6-220ENST00000637450 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
CLN6-220ENST00000637450 RPL11P62913 178 aaKnown RBP13.5□□□□□ -0.25
CLN6-220ENST00000637450 MLANAQ16655 118 aa13.5□□□□□ -0.25
CLN6-220ENST00000637450 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms