RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DHODHQ02127 395 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 ANKRD55Q3KP44 614 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 TMEM61Q8N0U2 210 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 ZNF114Q8NC26 417 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 OR51S1Q8NGJ8 323 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 OR52B4Q8NGK2 314 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 TM2D3Q9BRN9 247 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 NXF2Q9GZY0 626 aaKnown RBP10.4□□□□□ -0.74
PNKP-228ENST00000637325 GPR132Q9UNW8 380 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 I3L2K1 104 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 P0C879 139 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 S100A5P33763 92 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 ETV6P41212 452 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 SUB1P53999 127 aaKnown RBP eCLIP10.39□□□□□ -0.75
PNKP-228ENST00000637325 RELQ04864 619 aaPredicted RBP10.39□□□□□ -0.75
PNKP-228ENST00000637325 HAGHQ16775 308 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 PYDC2Q56P42 97 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 TXN2Q99757 166 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 TMEM222Q9H0R3 208 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 C5orf66Q9H5L9 145 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 DAZ1Q9NQZ3 744 aaKnown RBP10.39□□□□□ -0.75
PNKP-228ENST00000637325 KCNIP3Q9Y2W7 256 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 DNAH7Q8WXX0 4024 aa10.39□□□□□ -0.75
PNKP-228ENST00000637325 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 CRYM-AS1A6NIL9 109 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 F8W735 103 aaPredicted RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 GNG7O60262 68 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 YIF1AO95070 293 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 CDS2O95674 445 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 FAUP35544 74 aaKnown RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 LAMTOR1Q6IAA8 161 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 FAM219AQ8IW50 185 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 SELENOHQ8IZQ5 122 aaKnown RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 GLYATL2Q8WU03 294 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 RBPMSQ93062 196 aaKnown RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 SOSTQ9BQB4 213 aa10.38□□□□□ -0.75
PNKP-228ENST00000637325 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.38□□□□□ -0.75
PNKP-228ENST00000637325 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 A0A0G2JRQ6 117 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 C3orf84H3BNL1 204 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 K7EMT4 169 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 CORTO00230 105 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 CTSGP08311 255 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 ADMP35318 185 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 NPBWR1P48145 328 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 TMEM268Q5VZI3 342 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 DUSP18Q8NEJ0 188 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
PNKP-228ENST00000637325 C15orf62A8K5M9 175 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 INS-IGF2F8WCM5 200 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 AKR1C4P17516 323 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 FCGR2BP31994 310 aaPredicted RBP10.36□□□□□ -0.75
PNKP-228ENST00000637325 AP3S2P59780 193 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 SPCS3P61009 180 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 Q6ZRM9 215 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 LHFPL5Q8TAF8 219 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 CACNG5Q9UF02 275 aa10.36□□□□□ -0.75
PNKP-228ENST00000637325 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 RNASE2P10153 161 aaKnown RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 ANXA3P12429 323 aa10.35□□□□□ -0.75
PNKP-228ENST00000637325 TOMM5Q8N4H5 51 aa10.35□□□□□ -0.75
PNKP-228ENST00000637325 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
PNKP-228ENST00000637325 MUC7Q8TAX7 377 aa10.35□□□□□ -0.75
PNKP-228ENST00000637325 GPR146Q96CH1 333 aa10.35□□□□□ -0.75
PNKP-228ENST00000637325 SPAG8Q99932 426 aaPredicted RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 HEYLQ9NQ87 328 aaPredicted RBP10.35□□□□□ -0.75
PNKP-228ENST00000637325 CEBPZOSA8MTT3 80 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 OPRK1P41145 380 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 HTR2BP41595 481 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 TMEM187Q14656 261 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
PNKP-228ENST00000637325 TMEM116Q8NCL8 245 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 IL22RA2Q969J5 263 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 TMEM56-RWDD3S4R434 201 aa10.34□□□□□ -0.75
PNKP-228ENST00000637325 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 IGHV7-4-1A0A0J9YVY3 117 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 TSPAN4O14817 238 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 SCGB2A1O75556 95 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 KLF9Q13886 244 aaPredicted RBP10.33□□□□□ -0.76
PNKP-228ENST00000637325 TMED4Q7Z7H5 227 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 TMEM230Q96A57 120 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 GALNT14Q96FL9 552 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms