RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 GINS3Q9BRX5 216 aa7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 FAM103A1Q9BTL3 118 aaKnown RBP7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 ARV1Q9H2C2 271 aa7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 WFDC1Q9HC57 220 aa7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
CACNA1A-239ENST00000637297 A0A1W2PN81 502 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 ZNF705EA8MWA4 302 aaPredicted RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 G3V318 75 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 H3BP45 60 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 KBTBD11O94819 623 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SCAF4O95104 1147 aaKnown RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 IFNA17P01571 189 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 CRYGBP07316 175 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 OR9G9P0C7N8 305 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SEC11BP0C7V7 166 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 CHRNA7P36544 502 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SPCS3P61009 180 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 RPP30P78346 268 aaKnown RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 BLOC1S1P78537 153 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 PJVKQ0ZLH3 352 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 PRSS8Q16651 343 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 AARDQ4LEZ3 155 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 C10orf99Q6UWK7 81 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 HSD17B11Q8NBQ5 300 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 LFNGQ8NES3 379 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 OR52E5Q8NH55 327 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 DTD1Q8TEA8 209 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 GNPNAT1Q96EK6 184 aaPredicted RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 ATP5SQ99766 215 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 QTRT1Q9BXR0 403 aaKnown RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 ZNF355PQ9NSJ1 428 aa7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 STRAPQ9Y3F4 350 aaKnown RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 TSSC4Q9Y5U2 329 aaPredicted RBP7.23□□□□□ -1.25
CACNA1A-239ENST00000637297 MFSD2BA6NFX1 497 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 ELANEP08246 267 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 METTL15P1P0C7V9 234 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 SPP1P10451 314 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 PF4V1P10720 104 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 MAS1LP35410 378 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 SULT1A2P50226 295 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 RAB5CP51148 216 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 OR2B8PP59922 312 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 POU2AF1Q16633 256 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 AKIRIN2Q53H80 203 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 HIST2H2BDQ6DRA6 164 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 OR4A47Q6IF82 309 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 HSD17B13Q7Z5P4 300 aaPredicted RBP7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 NDUFA11Q86Y39 141 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 PUSL1Q8N0Z8 303 aaKnown RBP7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 LILRB2Q8N423 598 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 SCGB1C1Q8TD33 95 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 TMEM68Q96MH6 324 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 HIPK2Q9H2X6 1198 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 ZNF430Q9H8G1 570 aaPredicted RBP7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 ENY2Q9NPA8 101 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 BET1LQ9NYM9 111 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 ZNF580Q9UK33 172 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 PRNDQ9UKY0 176 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 STAB1Q9NY15 2570 aa7.22□□□□□ -1.25
CACNA1A-239ENST00000637297 I3L521 148 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 PRH1P02810 166 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 RPL27AP46776 148 aaKnown RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 NDPQ00604 133 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 FOXE3Q13461 319 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 ATP6V1FQ16864 119 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 PDLIM3Q53GG5 364 aaPredicted RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 TMEM14EPQ6UXP3 125 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 ZNF429Q86V71 674 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 OR4F17Q8NGA8 305 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 WIPF2Q8TF74 440 aaPredicted RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 SRSF12Q8WXF0 261 aaKnown RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 MARC2Q969Z3 335 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 OR4F4Q96R69 305 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 COMMD5Q9GZQ3 224 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 FOXA2Q9Y261 457 aaPredicted RBP7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 FBXO7Q9Y3I1 522 aa7.21□□□□□ -1.26
CACNA1A-239ENST00000637297 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 UMAD1C9J7I0 102 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 TEX46H3BTG2 121 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 UPK2O00526 184 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 IGHG4P01861 327 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 FGF2P09038 288 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 APELAP0DMC3 54 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 EGR2P11161 476 aaPredicted RBP7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 ATP6V0CP27449 155 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 CAMLGP49069 296 aa7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 HOXA1P49639 335 aaPredicted RBP7.2□□□□□ -1.26
CACNA1A-239ENST00000637297 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms