RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IGHV3-21A0A0B4J1V1 117 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 INS-IGF2F8WCM5 200 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 CCSO14618 274 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 TRBV12-3P01733 135 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 SNCAP37840 140 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 ZNF616Q08AN1 781 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 TCTE3Q8IZS6 198 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 ZNF114Q8NC26 417 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 MISP3Q96FF7 219 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 THYN1Q9P016 225 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 CACFD1Q9UGQ2 172 aa13.27□□□□□ -0.29
CLN6-218ENST00000637223 CMYA5Q8N3K9 4069 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 LINC01619G3V211 115 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 HSPB1P04792 205 aaKnown RBP13.26□□□□□ -0.29
CLN6-218ENST00000637223 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
CLN6-218ENST00000637223 FHL3Q13643 280 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 OR1L6Q8NGR2 347 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 DTD1Q8TEA8 209 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 EEF1AKMT3Q96AZ1 226 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 ST6GAL2Q96JF0 529 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
CLN6-218ENST00000637223 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
CLN6-218ENST00000637223 FAM25EA8MYX2 175 aa13.25□□□□□ -0.29
CLN6-218ENST00000637223 SLURP1P55000 103 aa13.25□□□□□ -0.29
CLN6-218ENST00000637223 FCN2Q15485 313 aa13.25□□□□□ -0.29
CLN6-218ENST00000637223 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
CLN6-218ENST00000637223 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
CLN6-218ENST00000637223 HIPK2Q9H2X6 1198 aa13.25□□□□□ -0.29
CLN6-218ENST00000637223 RANGRFQ9HD47 186 aaPredicted RBP13.25□□□□□ -0.29
CLN6-218ENST00000637223 NOTCH1P46531 2555 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
CLN6-218ENST00000637223 K7EIM0 57 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 GIPP09681 153 aaPredicted RBP13.24□□□□□ -0.29
CLN6-218ENST00000637223 OR8U8P0C7N1 319 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 IAPPP10997 89 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 CD33P20138 364 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLN6-218ENST00000637223 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 OR11H7Q8NGC8 314 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
CLN6-218ENST00000637223 CXorf58Q96LI9 332 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 CCDC140Q96MF4 163 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 VWFP04275 2813 aa13.24□□□□□ -0.29
CLN6-218ENST00000637223 FAM90A26D6RGX4 464 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 PPP5D1E7EU14 171 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 MT-CO2P00403 227 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLN6-218ENST00000637223 HTR2BP41595 481 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 RAP2BP61225 183 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 ZBTB8BQ8NAP8 495 aaPredicted RBP13.23□□□□□ -0.29
CLN6-218ENST00000637223 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 OR4D5Q8NGN0 318 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 VN1R17PQ8TDU5 208 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 SCARB1Q8WTV0 552 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
CLN6-218ENST00000637223 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
CLN6-218ENST00000637223 PRKDCP78527 4128 aaKnown RBP13.23□□□□□ -0.29
CLN6-218ENST00000637223 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 C5orf51A6NDU8 294 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 I3L2K1 104 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 BMPR1BO00238 502 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 MED6O75586 246 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 NPY1RP25929 384 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
CLN6-218ENST00000637223 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
CLN6-218ENST00000637223 WFDC9Q8NEX5 89 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 DCUN1D4Q92564 292 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 MGAT4CQ9UBM8 478 aa13.22□□□□□ -0.29
CLN6-218ENST00000637223 WRBO00258 174 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 SYNGR2O43760 224 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 IFNA10P01566 189 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 GPR183P32249 361 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 POLR2GP62487 172 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLN6-218ENST00000637223 CYCSP99999 105 aaKnown RBP13.21□□□□□ -0.29
CLN6-218ENST00000637223 ID3Q02535 119 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 C2orf83Q53S99 150 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 PVRIGQ6DKI7 326 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 UBAC2Q8NBM4 344 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
CLN6-218ENST00000637223 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
CLN6-218ENST00000637223 CORTO00230 105 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 GOSR2O14653 212 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 C1QBP02746 253 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 CLEC3BP05452 202 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 IGLL1P15814 213 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 CXCL3P19876 107 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 ZP3P21754 424 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 ARL3P36405 182 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 Q56UQ5 140 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 FAM209BQ5JX69 171 aa13.2□□□□□ -0.3
CLN6-218ENST00000637223 GSG1LQ6UXU4 331 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms