RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FAM220BPB1ANY3 271 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 H3BMG7 143 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 K7N7A8 449 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 M0R129 80 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 M0R378 163 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 COX7A2LO14548 114 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 UQCRQO14949 82 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 CD5LO43866 347 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 PMS2P2O95744 297 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 NAPSAO96009 420 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TSHBP01222 138 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 SEC11BP0C7V7 166 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 LINC00869P0C866 280 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 IGHV4-38-2P0DP08 117 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 PYYP10082 97 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 FABP2P12104 132 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 AQP1P29972 269 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 SRP14P37108 136 aaKnown RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 INPP1P49441 399 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TAS2R19P59542 299 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 GABARAPL2P60520 117 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 RBMY1FQ15415 496 aaKnown RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 CCL14Q16627 93 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 LINC00303Q3SY05 128 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 Q56UQ5 140 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 COA6Q5JTJ3 125 aaKnown RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 WDR38Q5JTN6 314 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 C9orf153Q5TBE3 101 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 HES3Q5TGS1 186 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 AADACL3Q5VUY0 350 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 SLC25A34Q6PIV7 304 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 LCA10Q71F78 164 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TMEM183AQ8IXX5 376 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 RNF182Q8N6D2 247 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 OR4B1Q8NGF8 309 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 OR10G8Q8NGN5 311 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 OR5C1Q8NGR4 320 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 OTOSQ8NHW6 89 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TMEM158Q8WZ71 300 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TOMM6Q96B49 74 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 ABHD14BQ96IU4 210 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 PKMYT1Q99640 499 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TMEM243Q9BU79 118 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 PLA2G2FQ9BZM2 168 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 AGPAT4-IT1Q9H0P7 198 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 NAA60Q9H7X0 242 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TMEM106BQ9NUM4 274 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 AK3Q9UIJ7 227 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 TPRKBQ9Y3C4 175 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 CUL7Q14999 1698 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 ZC3H13Q5T200 1668 aaKnown RBP2.27□□□□□ -2.05
VIM-210ENST00000637053 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 ATG2AQ2TAZ0 1938 aa2.27□□□□□ -2.05
VIM-210ENST00000637053 CDK5RAP2Q96SN8 1893 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 RTEL1-TNFRSF6BF6WH68 1400 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 ABCC5O15440 1437 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 KDM6AO15550 1401 aaPredicted RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 ATRNO75882 1429 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 LRRIQ1Q96JM4 1722 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 TRAV12-2A0A075B6T6 113 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 TRAV13-1A0A0B4J241 112 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 CCL15-CCL14A0A0B4J2E2 113 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 MUC21A0A0G2JKD1 596 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 C3orf85A0A1B0GTC6 90 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 A0A1B0GVT2 93 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 IGLL5B9A064 214 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 C9JQL5 133 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 K7EQD1 137 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 K7EQG2 157 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 M0R1X1 148 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 CST7O76096 145 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 DUSP14O95147 198 aaKnown RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 NXPH4O95158 308 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 CGAP01215 116 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 TCRAP04437 139 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 INAFM2P0DMQ5 153 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 CRYGAP11844 174 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 LGALS3P17931 250 aaKnown RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 IGHV1-2P23083 117 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 POLR2IP36954 125 aaKnown RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 SNCAP37840 140 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 CA7P43166 264 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 ZNF80P51504 273 aaPredicted RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 SYNJ2BPP57105 145 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 YPEL3P61236 119 aaPredicted RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 ERVK-16P61578 105 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 REG3AQ06141 175 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 Q0VG73 95 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 ODF3L2Q3SX64 289 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 MRPL2Q5T653 305 aaKnown RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 EBLN2Q6P2I7 272 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 LINC00596Q86U02 117 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 MARCH3Q86UD3 253 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 WFDC11Q8NEX6 87 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 FLVCR1-AS1Q8TAF5 88 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 LMO3Q8TAP4 145 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms