RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 PAX8Q06710 450 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 ZNF506Q5JVG8 444 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 SVBPQ8N300 66 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 NPBQ8NG41 125 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 NKX6-2Q9C056 277 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 MRPL36Q9P0J6 103 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-231ENST00000636816 IGHV3OR16-10A0A075B7F0 116 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 LOC102723971A0A1B0GUV8 181 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 NUPL2O15504 423 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 CYB5BO43169 146 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 SLC16A13Q7RTY0 426 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 STPG3Q8N7X2 389 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 OR2T10Q8NGZ9 312 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 SRSF12Q8WXF0 261 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 POLQO75417 2590 aa12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 KMT2BQ9UMN6 2715 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-231ENST00000636816 NDUFA3O95167 84 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 LINC00869P0C866 280 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 B2MP61769 119 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 TBL2Q9Y4P3 447 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 OR10J1P30954 320 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 GPX4P36969 197 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 PRR20EP86478 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 PRR20CP86479 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 PRR20DP86480 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 PRR20BP86481 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 PRR20AP86496 221 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 DMRT1Q9Y5R6 373 aa12.63□□□□□ -0.39
CACNA1A-231ENST00000636816 IGHV3-21A0A0B4J1V1 117 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 FAM74A7A6NL05 159 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 SEC14L6B5MCN3 397 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 CNIH1O95406 144 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 CEBPGP53567 150 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 RAB31Q13636 194 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 FAM74A3Q4VXF1 159 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 Q8N6K4 173 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-231ENST00000636816 ANKRD17O75179 2603 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 NPFFO15130 113 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 BCL2P10415 239 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 EBI3Q14213 229 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 C5orf64Q2M2E5 130 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 SPATA31B1PQ5VZV4 182 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 SLC35E1Q96K37 410 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 ABCA1O95477 2261 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 PAX1P15863 534 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 CLEC12BQ2HXU8 276 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 KHDC3LQ587J8 217 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 CYB561D1Q8N8Q1 229 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 ABHD5Q8WTS1 349 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 SEPSECSQ9HD40 501 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-231ENST00000636816 HSPB1P04792 205 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 TMEM11P17152 192 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 FXYD3Q14802 87 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 SLC25A33Q9BSK2 321 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 SNAPINO95295 136 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 TMEM88Q6PEY1 159 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 C20orf24Q9BUV8 137 aa12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 F11RQ9Y624 299 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 SOX21Q9Y651 276 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-231ENST00000636816 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 IGKV1D-37A0A075B6S9 117 aa12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 SOX15O60248 233 aa12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 VAX2Q9UIW0 290 aa12.59□□□□□ -0.39
CACNA1A-231ENST00000636816 ZFHX3Q15911 3703 aa12.58□□□□□ -0.39
CACNA1A-231ENST00000636816 AKR1C3P42330 323 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms