RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 TMEM50AO95807 157 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 CXCL3P19876 107 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 NPY1RP25929 384 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 PAX9P55771 341 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 FCN2Q15485 313 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 WDR89Q96FK6 387 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 NMES1Q9C002 83 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 THYN1Q9P016 225 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 S4R3C0 116 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 U3KQ87 197 aa12.86□□□□□ -0.35
CDC42EP4-209ENST00000630622 VWFP04275 2813 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 I3L2K1 104 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 K7EPK0 472 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 LY86O95711 162 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 TSPAN15O95858 294 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 RRAS2P62070 204 aaPredicted RBP12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 ETV3LQ6ZN32 361 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 RAX2Q96IS3 184 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
CDC42EP4-209ENST00000630622 M0QZ24 198 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 IFNA10P01566 189 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 CYCSP99999 105 aaKnown RBP12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 RAB32Q13637 225 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 SMIM8Q96KF7 97 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 RAB40CQ96S21 281 aa12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 FNDC4Q9H6D8 234 aaPredicted RBP12.84□□□□□ -0.35
CDC42EP4-209ENST00000630622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 IGHV3-21A0A0B4J1V1 117 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 CCL24O00175 119 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 CORTO00230 105 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 MT-CO2P00403 227 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 TRBV12-3P01733 135 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 IGHV3-23P01764 117 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 Q6ZNX1 250 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 NOXA1Q86UR1 476 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 RNASEH2CQ8TDP1 164 aaKnown RBP12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
CDC42EP4-209ENST00000630622 IGHV4OR15-8A0A075B7B6 117 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 A0A087WW49 117 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 H3BP45 60 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 TAS2R30P59541 319 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 S100A10P60903 97 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 FHL3Q13643 280 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 PSENENQ9NZ42 101 aa12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
CDC42EP4-209ENST00000630622 DNHD1Q96M86 4753 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 TSC22D2O75157 780 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 HSPB1P04792 205 aaKnown RBP12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 MYCNOSP40205 109 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 RPP30P78346 268 aaKnown RBP12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 MLANAQ16655 118 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 PPP1R1CQ8WVI7 109 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 C21orf62Q9NYP8 219 aa12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 STRAPQ9Y3F4 350 aaKnown RBP12.81□□□□□ -0.36
CDC42EP4-209ENST00000630622 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 H0YIZ8 118 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 BMPR1BO00238 502 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 DEDDO75618 318 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 IFNA4P05014 189 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 OPRK1P41145 380 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 RAB11AP62491 216 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 ZNF616Q08AN1 781 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 RANGRFQ9HD47 186 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
CDC42EP4-209ENST00000630622 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
CDC42EP4-209ENST00000630622 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
CDC42EP4-209ENST00000630622 PPP5D1E7EU14 171 aa12.79□□□□□ -0.36
CDC42EP4-209ENST00000630622 LINC01619G3V211 115 aa12.79□□□□□ -0.36
CDC42EP4-209ENST00000630622 L7N2F9 121 aa12.79□□□□□ -0.36
CDC42EP4-209ENST00000630622 OR8U8P0C7N1 319 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms