RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 IZUMO4Q1ZYL8 232 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 RRNAD1Q96FB5 475 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 TXN2Q99757 166 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 PDCD10Q9BUL8 212 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 HIPK2Q9H2X6 1198 aa12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-214ENST00000628614 C15orf62A8K5M9 175 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 K7EMT4 169 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 MT-CO2P00403 227 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 IFNA17P01571 189 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 CTSGP08311 255 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 DYNC2H1Q8NCM8 4307 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-214ENST00000628614 A0A0B4J293 547 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 INS-IGF2F8WCM5 200 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 TSPAN4O14817 238 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 SNCAP37840 140 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 SP6Q3SY56 376 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 SPINK9Q5DT21 86 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 PINX1Q96BK5 328 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-214ENST00000628614 H3BMQ9 156 aa12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 SUB1P53999 127 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 PRRT1Q99946 306 aa12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 RETNQ9HD89 108 aa12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 RSL24D1Q9UHA3 163 aaKnown RBP12.86□□□□□ -0.35
SPTAN1-214ENST00000628614 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 GNG7O60262 68 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 OR5AC1P0C628 307 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 HOXA1P49639 335 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 RTBDNQ9BSG5 229 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 NAA60Q9H7X0 242 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 ENY2Q9NPA8 101 aa12.85□□□□□ -0.35
SPTAN1-214ENST00000628614 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 ANKRD20A5PA0PJZ0 165 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 CORTO00230 105 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 ZNF207O43670 478 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 YIF1AO95070 293 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 CDS2O95674 445 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 NPBWR1P48145 328 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 DHODHQ02127 395 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 DUSP18Q8NEJ0 188 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 RBPMSQ93062 196 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
SPTAN1-214ENST00000628614 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 A0A0G2JRQ6 117 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 IGHV3-48P01763 117 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 ETV6P41212 452 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 PVRIGQ6DKI7 326 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 TMEM116Q8NCL8 245 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 OR51S1Q8NGJ8 323 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 SACSQ9NZJ4 4579 aa12.83□□□□□ -0.36
SPTAN1-214ENST00000628614 STARD9Q9P2P6 4700 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 IGHV7-4-1A0A0J9YVY3 117 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 RNASE2P10153 161 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 TNFSF8P32971 234 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 SPCS3P61009 180 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 OR52E5Q8NH55 327 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 MCFD2Q8NI22 146 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 GINS3Q9BRX5 216 aa12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-214ENST00000628614 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 CHEK1O14757 476 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 BMI1P35226 326 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 Q6ZRM9 215 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 LHFPL5Q8TAF8 219 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 SOSTQ9BQB4 213 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 RHPN1-AS1Q9BWJ2 59 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 UBQLN2Q9UHD9 624 aa12.81□□□□□ -0.36
SPTAN1-214ENST00000628614 SCGB2A1O75556 95 aa12.8□□□□□ -0.36
SPTAN1-214ENST00000628614 OPRK1P41145 380 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms