RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
SOX2-OT-247ENST00000628347 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 CD5P06127 495 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 ELK1P19419 428 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 LHFPL1Q86WI0 220 aa9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 C6orf62Q9GZU0 229 aaPredicted RBP9.2□□□□□ -0.94
SOX2-OT-247ENST00000628347 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 GNG7O60262 68 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 HPGDSO60760 199 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 P0C879 139 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 VBP1P61758 197 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 PMS2P11Q13670 270 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 CEMP1Q6PRD7 247 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 TMEM217Q8N7C4 229 aa9.19□□□□□ -0.94
SOX2-OT-247ENST00000628347 M0QYG6 137 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 YIF1AO95070 293 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 IGKV1-5P01602 117 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 RPL35AP18077 110 aaKnown RBP9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 TBPP20226 339 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 NPBWR1P48145 328 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 RORCP51449 518 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 MZT2AQ6P582 158 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 APRG1Q8IVJ8 170 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 ARRDC1Q8N5I2 433 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
SOX2-OT-247ENST00000628347 HECTD4Q9Y4D8 3996 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 A0A0B4J293 547 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 ATG12O94817 140 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 PGAM2P15259 253 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 PIGPP57054 158 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 PINX1Q96BK5 328 aaKnown RBP9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 TP53RKQ96S44 253 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
SOX2-OT-247ENST00000628347 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 CORTO00230 105 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 B3GALNT1O75752 331 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 DFFBO76075 338 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 CD3DP04234 171 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 SNCAP37840 140 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 IZUMO4Q1ZYL8 232 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 TCF24Q7RTU0 167 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 OR52I2Q8NH67 350 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 AP3S1Q92572 193 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 KLK11Q9UBX7 282 aa9.16□□□□□ -0.94
SOX2-OT-247ENST00000628347 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 GABARAPO95166 117 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 TMEM50AO95807 157 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 LY6G6CO95867 125 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 CD74P04233 296 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 RNASE2P10153 161 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 PI3P19957 117 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 UCP1P25874 307 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 RPL5P46777 297 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 TFPI2P48307 235 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 AKR1C2P52895 323 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 CTF1Q16619 201 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 AARDQ4LEZ3 155 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 SPINK9Q5DT21 86 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 CCDC71LQ8N9Z2 235 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 TMEM229BQ8NBD8 167 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 ZFAND1Q8TCF1 268 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 C15orf40Q8WUR7 153 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 ST8SIA2Q92186 375 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-247ENST00000628347 IGKV3-7A0A075B6H7 116 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 IGHV3OR16-13A0A075B7E8 117 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 IGHV3-74A0A0B4J1X5 117 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 IFNA17P01571 189 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 APOHP02749 345 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 BSXQ3C1V8 233 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 RNASE12Q5GAN4 147 aaKnown RBP9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 LILRB2Q8N423 598 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 GBGT1Q8N5D6 347 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms