RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TOLLIPQ9H0E2 274 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 IFI27L2Q9H2X8 130 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 FBLN5Q9UBX5 448 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 H0YJW9 148 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 CHEK1O14757 476 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 RPL30P62888 115 aaKnown RBP7.38□□□□□ -1.23
HDAC9-229ENST00000622668 OXA1LQ15070 435 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 SIGIRRQ6IA17 410 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 SMCO4Q9NRQ5 59 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 EML5Q05BV3 1969 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 FAM90A26D6RGX4 464 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 PLA2G10O15496 165 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 NAPSAO96009 420 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 IGKV1-16P04430 117 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 SPNP16150 400 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 TSPOP30536 169 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 C2orf68Q2NKX9 166 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 FAM209BQ5JX69 171 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF383Q8NA42 475 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 OR1N2Q8NGR9 330 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 GPX1P07203 203 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 RPL35AP18077 110 aaKnown RBP7.37□□□□□ -1.23
HDAC9-229ENST00000622668 UCP1P25874 307 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 RUNX1Q01196 453 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF600Q6ZNG1 722 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF767PQ75MW2 155 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 NR2C2APQ86WQ0 139 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 BCL6BQ8N143 479 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-229ENST00000622668 RNF5Q99942 180 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 PRELID1Q9Y255 219 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 ARHGAP32A7KAX9 2087 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 OVOL3O00110 214 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 HSPB1P04792 205 aaKnown RBP7.37□□□□□ -1.23
HDAC9-229ENST00000622668 MARVELD1Q9BSK0 173 aa7.37□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-229ENST00000622668 TRANK1O15050 2925 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 RBFOX2O43251 390 aaKnown RBP eCLIP7.36□□□□□ -1.23
HDAC9-229ENST00000622668 CD5LO43866 347 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 IGHV4-31P0DP07 118 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 S100A1P23297 94 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 GUSBP1Q15486 140 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 RBM38Q9H0Z9 239 aaKnown RBP7.36□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF257Q9Y2Q1 563 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 PEF1Q9UBV8 284 aaKnown RBP7.36□□□□□ -1.23
HDAC9-229ENST00000622668 USP24Q9UPU5 2620 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 TRIOO75962 3097 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 RNASEK-C17orf49H0YIS7 233 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 ERVFC1-1P60608 527 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 BLCAPP62952 87 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 TMEM187Q14656 261 aa7.36□□□□□ -1.23
HDAC9-229ENST00000622668 FAM53AQ6NSI3 398 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-229ENST00000622668 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
HDAC9-229ENST00000622668 EIF3GO75821 320 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 MBPP02686 304 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 S100A9P06702 114 aaKnown RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 GATA2P23769 480 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 LMO1P25800 156 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 COMMD7Q86VX2 200 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 GLMPQ8WWB7 406 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 NEURL2Q9BR09 285 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 BIN3Q9NQY0 253 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 BAHCC1Q9P281 2608 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 COL5A1P20908 1838 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 SRSF10O75494 262 aaKnown RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 CTRB1P17538 263 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 MFAP2P55001 183 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 NDUFA6P56556 154 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 LMO4P61968 165 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 CTRB2Q6GPI1 263 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 CADM3Q8N126 398 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 USMG5Q96IX5 58 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 TMEM204Q9BSN7 226 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 A0A1B0GVG6 124 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 PGPA6NDG6 321 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 MT-ND4LP03901 98 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 CNTFRP26992 372 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 RAB5CP51148 216 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 ERVK11-1P61568 191 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 DHRS11Q6UWP2 260 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF562Q6V9R5 426 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 PRNTQ86SH4 94 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 COMMD1Q8N668 190 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 C7orf66A4D0T2 115 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 OVOL1O14753 267 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 BCL2L11O43521 198 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 CD74P04233 296 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 ATP5IP56385 69 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-229ENST00000622668 KHDC3LQ587J8 217 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
HDAC9-229ENST00000622668 OR10C1Q96KK4 312 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms