RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 C21orf140B9A014 251 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 DOLPP1Q86YN1 238 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR8B3Q8NGG8 313 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR1L1Q8NH94 360 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR8B2Q96RD0 313 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 SPRR3Q9UBC9 169 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 KLF13Q9Y2Y9 288 aaPredicted RBP10.28□□□□□ -0.76
LITAF-221ENST00000622633 UBE2L5PA0A1B0GUS4 154 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 H3BRM9 83 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 ZNF90Q03938 601 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 ZNF808Q8N4W9 903 aaPredicted RBP10.28□□□□□ -0.76
LITAF-221ENST00000622633 MDS2Q8NDY4 140 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 OR10X1Q8NGY0 326 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
LITAF-221ENST00000622633 GPR82Q96P67 336 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 MBNL3Q9NUK0 354 aaKnown RBP10.28□□□□□ -0.76
LITAF-221ENST00000622633 POLDIP2Q9Y2S7 368 aa10.28□□□□□ -0.76
LITAF-221ENST00000622633 B5MCH6 92 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 HLA-DRB1P01911 266 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 FOXE3Q13461 319 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 ATP1A1-AS1Q5TC04 95 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 ZNF835Q9Y2P0 537 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 DIDO1Q9BTC0 2240 aaKnown RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 PSPNO60542 156 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 TFF1P04155 84 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 G6PCP35575 357 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 RPS16P62249 146 aaKnown RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 RPL30P62888 115 aaKnown RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 SEC11AP67812 179 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 SERF2P84101 59 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 ZNF816Q0VGE8 651 aaPredicted RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 ZNF146Q15072 292 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 CXorf67Q86X51 503 aaPredicted RBP10.27□□□□□ -0.77
LITAF-221ENST00000622633 Q8IYB0 196 aa10.27□□□□□ -0.77
LITAF-221ENST00000622633 TAF15Q92804 592 aaKnown RBP eCLIP10.27□□□□□ -0.77
LITAF-221ENST00000622633 TRAV9-1A0A075B6T8 112 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 TRGV5A0A0B4J1U4 118 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 WNT9BO14905 357 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 IGKV1D-33P01593 117 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 IGKV1-33P01594 117 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 EGR1P18146 543 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 CRYBB3P26998 211 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 PSG7Q13046 419 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 COX19Q49B96 90 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 ZNF826PQ6ZT77 177 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 RPP25LQ8N5L8 163 aaKnown RBP10.26□□□□□ -0.77
LITAF-221ENST00000622633 C5orf30Q96GV9 206 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 HES4Q9HCC6 221 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 CLCF1Q9UBD9 225 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 SPCS1Q9Y6A9 102 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 NCOR1O75376 2440 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 PRR33A8MZF0 331 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 LYZL6O75951 148 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 VSTM2AQ8TAG5 236 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 QTRT1Q9BXR0 403 aaKnown RBP10.26□□□□□ -0.77
LITAF-221ENST00000622633 RAB1BQ9H0U4 201 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 OR2D2Q9H210 308 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
LITAF-221ENST00000622633 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 C12orf77C9JDV5 145 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ZNF883P0CG24 379 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 IGHV1-2P23083 117 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 GPR183P32249 361 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 MPV17P39210 176 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 LGALS4P56470 323 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 UBE2G1P62253 170 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ATP5G2Q06055 141 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ADIPOQQ15848 244 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 TMEM14EPQ6UXP3 125 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 OBP2BQ9NPH6 170 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 SCRT2Q9NQ03 307 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 MDFIC2A0A1B0GVS7 189 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 CFHR2P36980 270 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 LINC00205P59089 165 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ACSM6Q6P461 480 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ZNF645Q8N7E2 425 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 ZNF439Q8NDP4 499 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 GNB1LQ9BYB4 327 aa10.25□□□□□ -0.77
LITAF-221ENST00000622633 CACNA1DQ01668 2161 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 TMEM30CPA0ZSE6 113 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 C17orf98A8MV24 154 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 PAGE4O60829 102 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 CD59P13987 128 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 ZNF766Q5HY98 468 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 DHRS13Q6UX07 377 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 KIR3DL3Q8N743 410 aa10.24□□□□□ -0.77
LITAF-221ENST00000622633 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms