RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SLC39A9Q9NUM3 307 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 C1RLQ9NZP8 487 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 DOPEY2Q9Y3R5 2298 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 GATA3P23771 443 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 PEA15Q15121 130 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 Q5PR19 223 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 MIC13Q5XKP0 118 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 SSX7Q7RTT5 188 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 ACTR3CQ9C0K3 210 aaPredicted RBP17.07■□□□□ 0.32
SPAST-204ENST00000621856 SLC25A22Q9H936 323 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 TRAV1-1A0A0B4J248 108 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 MAP1LC3B2A6NCE7 125 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 CD5P06127 495 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 IGHV4-38-2P0DP08 117 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 MAP1LC3BQ9GZQ8 125 aa17.07■□□□□ 0.32
SPAST-204ENST00000621856 RNF223E7ERA6 249 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 CYB5BO43169 146 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 FGF8P55075 233 aaPredicted RBP17.06■□□□□ 0.32
SPAST-204ENST00000621856 LOXL1Q08397 574 aaPredicted RBP17.06■□□□□ 0.32
SPAST-204ENST00000621856 C19orf35Q6ZS72 473 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 CCDC28AQ8IWP9 274 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 OR1P1Q8NH06 330 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 OR2T6Q8NHC8 308 aa17.06■□□□□ 0.32
SPAST-204ENST00000621856 F11RQ9Y624 299 aaKnown RBP17.06■□□□□ 0.32
SPAST-204ENST00000621856 CTXND1A0A1B0GTU2 59 aa17.05■□□□□ 0.32
SPAST-204ENST00000621856 EIF3GO75821 320 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPAST-204ENST00000621856 MAPK1IP1LQ8NDC0 245 aa17.05■□□□□ 0.32
SPAST-204ENST00000621856 FNDC4Q9H6D8 234 aaPredicted RBP17.05■□□□□ 0.32
SPAST-204ENST00000621856 YIF1AO95070 293 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 MFAP2P55001 183 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 B2MP61769 119 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 ETFRF1Q6IPR1 90 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 ARPC1AQ92747 370 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 FAM103A1Q9BTL3 118 aaKnown RBP17.04■□□□□ 0.32
SPAST-204ENST00000621856 SCRT1Q9BWW7 348 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 TENM4Q6N022 2769 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 A0A0U1RQK1 487 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 RBFOX3A6NFN3 312 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 F8W036 122 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 CORTO00230 105 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 APOC3P02656 99 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 OR10J1P30954 320 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 RPL29P47914 159 aaKnown RBP17.04■□□□□ 0.32
SPAST-204ENST00000621856 CDC34P49427 236 aaPredicted RBP17.04■□□□□ 0.32
SPAST-204ENST00000621856 CX3CL1P78423 397 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 HAGHQ16775 308 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 GCSAMLQ5JQS6 135 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 PVRIGQ6DKI7 326 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 ZNF562Q6V9R5 426 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 STPG3Q8N7X2 389 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 Q8N9W7 124 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 MBD6Q96DN6 1003 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 PTPN13Q12923 2485 aa17.04■□□□□ 0.32
SPAST-204ENST00000621856 HMGB3O15347 200 aaKnown RBP17.03■□□□□ 0.32
SPAST-204ENST00000621856 IGHV3-48P01763 117 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 SFTA3P0C7M3 94 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 RAB24Q969Q5 203 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 RASL11BQ9BPW5 248 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 GNG13Q9P2W3 67 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 SLC45A2Q9UMX9 530 aa17.03■□□□□ 0.32
SPAST-204ENST00000621856 IGKV1OR2-108A0A075B7D4 117 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 A0A1W2PPV4 95 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 C9JQL5 133 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 DEFA4P12838 97 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 RARRES2Q99969 163 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 WNT10AQ9GZT5 417 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 POLQO75417 2590 aa17.02■□□□□ 0.32
SPAST-204ENST00000621856 CELSR2Q9HCU4 2923 aa17.02■□□□□ 0.31
SPAST-204ENST00000621856 TGFAP01135 160 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PPT1P50897 306 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 NPIPB3Q92617 1050 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 Q96MF0 132 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 SEC14L6B5MCN3 397 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 CTRB1P17538 263 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 ADCYAP1P18509 176 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 RND2P52198 227 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PRR20EP86478 221 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PRR20CP86479 221 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PRR20DP86480 221 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PRR20BP86481 221 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 PRR20AP86496 221 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 DEFA5Q01523 94 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 CTRB2Q6GPI1 263 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 C22orf15Q8WYQ4 148 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 SLC25A33Q9BSK2 321 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 MEGF9Q9H1U4 602 aa17.01■□□□□ 0.31
SPAST-204ENST00000621856 CENPEQ02224 2701 aa17■□□□□ 0.31
SPAST-204ENST00000621856 J3QLI3 93 aa17■□□□□ 0.31
SPAST-204ENST00000621856 AVPP01185 164 aa17■□□□□ 0.31
SPAST-204ENST00000621856 KLF17Q5JT82 389 aaPredicted RBP17■□□□□ 0.31
SPAST-204ENST00000621856 SEC11CQ9BY50 192 aa17■□□□□ 0.31
SPAST-204ENST00000621856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17■□□□□ 0.315e-6■■■■□ 22.8
SPAST-204ENST00000621856 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 ZFP92A6NM28 416 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 TSPAN9O75954 239 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 IFNA1P01562 189 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 HLA-DRB1P01911 266 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 LINC00869P0C866 280 aa16.99■□□□□ 0.31
SPAST-204ENST00000621856 NDPQ00604 133 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms