RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 OR10J4P0C629 311 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 IGLC1P0CG04 106 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 MGST1P10620 155 aaKnown RBP8.88□□□□□ -0.99
CDH1-214ENST00000621016 CFHR2P36980 270 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 ATP5G2Q06055 141 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 ACSM6Q6P461 480 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 OR13A1Q8NGR1 328 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 FER1L6-AS2Q96M78 137 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 PMCHL2Q9BQD1 86 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 CLEC7AQ9BXN2 247 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 GPX1P07203 203 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 CD59P13987 128 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 RPL15P61313 204 aaKnown RBP8.88□□□□□ -0.99
CDH1-214ENST00000621016 ZNF90Q03938 601 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 ZNRF1Q8ND25 227 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 OR10P1Q8NGE3 313 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 WDR61Q9GZS3 305 aaKnown RBP8.88□□□□□ -0.99
CDH1-214ENST00000621016 GNB4Q9HAV0 340 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 C7orf71A4D174 169 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 SNURFLB1AK76 121 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 MLNRO43193 412 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 GPR6P46095 362 aaPredicted RBP8.88□□□□□ -0.99
CDH1-214ENST00000621016 CCDC144NLQ6NUI1 221 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 FDCSPQ8NFU4 85 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 DUXBA0A1W2PPF3 345 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 TMEM30CPA0ZSE6 113 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 LINC00473A8K010 186 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 CDX4O14627 284 aaPredicted RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 FOXE3Q13461 319 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 SMPXQ9UHP9 88 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 MRPS16Q9Y3D3 137 aaKnown RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 USF1P22415 310 aaPredicted RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 PNKDQ8N490 385 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 SSMEM1Q8WWF3 244 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 C5orf30Q96GV9 206 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 LRFN3Q9BTN0 628 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 HEYLQ9NQ87 328 aaPredicted RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 STAG3L2P0CL84 134 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 TCL1AP56279 114 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 CACNA1BQ00975 2339 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 HSD52Q0P140 79 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 RPL39P5Q59GN2 51 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 UTF1Q5T230 341 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 LRRC29Q8WV35 223 aa8.87□□□□□ -0.99
CDH1-214ENST00000621016 TECRQ9NZ01 308 aaKnown RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 CISD1Q9NZ45 108 aaKnown RBP8.87□□□□□ -0.99
CDH1-214ENST00000621016 SPRY3O43610 288 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 PSMB3P49720 205 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 CYP2G1PQ6ZSU1 146 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 ABHD12Q8N2K0 398 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 MUC15Q8N387 334 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 OR51B2Q9Y5P1 312 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 WNT2P09544 360 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 ASPHD1Q5U4P2 390 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 Q6ZS49 121 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 ZNF114Q8NC26 417 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 COQ2Q96H96 371 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 QTRT1Q9BXR0 403 aaKnown RBP8.86□□□□□ -0.99
CDH1-214ENST00000621016 PKIBQ9C010 78 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
CDH1-214ENST00000621016 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.86□□□□□ -0.99
CDH1-214ENST00000621016 SPTBN1Q01082 2364 aaKnown RBP8.86□□□□□ -0.99
CDH1-214ENST00000621016 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
CDH1-214ENST00000621016 TRBV7-9A0A0J9YWB2 115 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 C21orf140B9A014 251 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 KBTBD11O94819 623 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 ADH4P08319 380 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 SP9P0CG40 484 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 HLA-DRB5Q30154 266 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 ACSF3Q4G176 576 aaPredicted RBP8.85□□□□□ -0.99
CDH1-214ENST00000621016 GMPPAQ96IJ6 420 aaPredicted RBP8.85□□□□□ -0.99
CDH1-214ENST00000621016 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 LRRC30A6NM36 301 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 SLC25A6P12236 298 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 HTD2P86397 168 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 CATR1Q13166 79 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 TM4SF20Q53R12 229 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 SPRNQ5BIV9 151 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 ACP7Q6ZNF0 438 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 FAM214BQ7L5A3 538 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 TMEM178AQ8NBL3 297 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 RNF183Q96D59 192 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 PGPEP1Q9NXJ5 209 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 PLXNB1O43157 2135 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 TRAV3A0A0B4J244 114 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 A0A1W2PPV4 95 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 IFNA1P01562 189 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 CECR9P0C854 216 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 MYOD1P15172 320 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 GPR12P47775 334 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 DEFB109BQ30KR1 87 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 C9orf106Q8NAJ2 232 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 MDS2Q8NDY4 140 aa8.85□□□□□ -0.99
CDH1-214ENST00000621016 MAP1AP78559 2803 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms