RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MRPL54Q6P161 138 aaKnown RBP5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 TPRX1Q8N7U7 411 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 LPAR2Q9HBW0 351 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 DNAJC4Q9NNZ3 241 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 BET1LQ9NYM9 111 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 TBL2Q9Y4P3 447 aaKnown RBP5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 OR5G3P0C626 314 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 SLC35B1P78383 322 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 STUMQ69YW2 141 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 STPG3Q8N7X2 389 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 SLC35E1Q96K37 410 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 C16orf97H3BN30 126 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 CCL21O00585 134 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 ADH4P08319 380 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 NPSP0C0P6 89 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 NPY1RP25929 384 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 YPEL3P61236 119 aaPredicted RBP5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 TIMM23BQ5SRD1 257 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 SLC35E4Q6ICL7 350 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 ZNF439Q8NDP4 499 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 IL19Q9UHD0 177 aa5.78□□□□□ -1.48
SRGAP3-213ENST00000618999 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 HLA-DQA1P01909 254 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 TFPI2P48307 235 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 GAGE1Q13065 139 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF718Q3SXZ3 478 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 HIST2H2BCQ6DN03 193 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 HIST2H2BDQ6DRA6 164 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 Q6ZWC4 215 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 RBFOX2O43251 390 aaKnown RBP eCLIP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 STAG3L2P0CL84 134 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 STAG3L3P0CL85 134 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 SSTR5P35346 364 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 DAZAP2Q15038 168 aaPredicted RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 PQLC2Q6ZP29 291 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ERASQ7Z444 233 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF114Q8NC26 417 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 OR5AN1Q8NGI8 311 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 KLF14Q8TD94 323 aaPredicted RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 TECRQ9NZ01 308 aaKnown RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ESPL1Q14674 2120 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 IGHV1-18A0A0C4DH31 117 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 IGKV3-15P01624 115 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 APCSP02743 223 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 IL6RP08887 468 aaPredicted RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 USF1P22415 310 aaPredicted RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 NPPCP23582 126 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 SRIP30626 198 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 KIR2DS2P43631 304 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 PSG7Q13046 419 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF146Q15072 292 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ALKBH6Q3KRA9 238 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 CENPWQ5EE01 88 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 TMEM108Q6UXF1 575 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF826PQ6ZT77 177 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ABHD12Q8N2K0 398 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 SLC24A4Q8NFF2 622 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 OR4S2Q8NH73 311 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 CXXC4Q9H2H0 198 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 SLC25A15Q9Y619 301 aa5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 SPTBN1Q01082 2364 aaKnown RBP5.77□□□□□ -1.49
SRGAP3-213ENST00000618999 ARHGAP21Q5T5U3 1957 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 C15orf62A8K5M9 175 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 NUPR1O60356 82 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 IGHV3-13P01766 116 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 IGHV3-7P01780 117 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 CDKN1AP38936 164 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 SELENOVP59797 346 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 FXYD3Q14802 87 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 VAMP3Q15836 100 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 TREML4Q6UXN2 200 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 TEX43Q6ZNM6 134 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 OR4C5Q8NGB2 326 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 KCNS1Q96KK3 526 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 DIRC2Q96SL1 478 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 NRN1Q9NPD7 142 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 ZFP30Q9Y2G7 519 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 IGHV2OR16-5A0A0B4J2B6 119 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 DPRXA6NFQ7 191 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 WNT9BO14905 357 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 IGLV2-14P01704 120 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 CRYBB3P26998 211 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 VKORC1Q9BQB6 163 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 GGTLC1Q9BX51 225 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 TCF19Q9Y242 345 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 PSPNO60542 156 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 MPV17P39210 176 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 HINT1P49773 126 aaPredicted RBP5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 SELENOTP62341 195 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 MMDQ15546 238 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 PMCHL1Q16048 86 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 SAPCD1Q5SSQ6 148 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 IBA57Q5T440 356 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms