RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
CNOT3-210ENST00000618939 IGKV1D-17A0A075B6S4 117 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 WDR86Q86TI4 376 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 IGKV1-39P01597 117 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 IGKV1D-39P04432 117 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 FOSL1P15407 271 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 GOLT1AQ6ZVE7 132 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 PARD6GQ9BYG4 376 aaPredicted RBP11.49□□□□□ -0.57
CNOT3-210ENST00000618939 LPAR2Q9HBW0 351 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 ABCA1O95477 2261 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 PCNX3Q9H6A9 2034 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 UTRNP46939 3433 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 OR2J3O76001 311 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 SOD3P08294 240 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 TIMP3P35625 211 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 PMCHL1Q16048 86 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 Q6ZSR3 168 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 Q8NFD4 153 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 MFAP4P55083 255 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 COL5A1-AS1Q5SY13 56 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
CNOT3-210ENST00000618939 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 TAS2R60P59551 318 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 HOXA4Q00056 320 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 ABCA4P78363 2273 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 LMO1P25800 156 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 PPOXP50336 477 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 RELBQ01201 579 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 MGST2Q99735 147 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 A0A1B0GV90 55 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 KHDC1LQ5JSQ8 128 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 SRSF12Q8WXF0 261 aaKnown RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
CNOT3-210ENST00000618939 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 GFRA3O60609 400 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 SMIM17P0DL12 118 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 AGMATQ9BSE5 352 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 ZNF257Q9Y2Q1 563 aa11.48□□□□□ -0.57
CNOT3-210ENST00000618939 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 MBD3L4A6NDZ8 208 aaPredicted RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 MBD3L3A6NE82 208 aaPredicted RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 MBD3L5A6NJ08 208 aaPredicted RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 PRSS1P07477 247 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 TMPRSS3P57727 454 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 JOSD1Q15040 202 aaPredicted RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 TBR1Q16650 682 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 MBD3L2Q8NHZ7 208 aaPredicted RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 UQCR10Q9UDW1 63 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 DENND4AQ7Z401 1863 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 TRAV30A0A087WSZ9 112 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 IL4P05112 153 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 ZNF788Q6ZQV5 615 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 ZCCHC14Q8WYQ9 949 aaKnown RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
CNOT3-210ENST00000618939 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 BMPR1BO00238 502 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 ADMP35318 185 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 PYY3Q5JQD4 70 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
CNOT3-210ENST00000618939 SERF1AO75920 110 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 VPS25Q9BRG1 176 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 AMBPP02760 352 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 FAM106CPP0CH98 169 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 HBBP68871 147 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 DPM3Q9P2X0 92 aa11.46□□□□□ -0.57
CNOT3-210ENST00000618939 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
CNOT3-210ENST00000618939 FOXA3P55318 350 aaPredicted RBP11.46□□□□□ -0.58
CNOT3-210ENST00000618939 OSTCQ9NRP0 149 aa11.46□□□□□ -0.58
CNOT3-210ENST00000618939 INTS1Q8N201 2190 aaKnown RBP11.46□□□□□ -0.58
CNOT3-210ENST00000618939 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 PYYP10082 97 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 FAM53AQ6NSI3 398 aaPredicted RBP11.45□□□□□ -0.58
CNOT3-210ENST00000618939 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 CBY1Q9Y3M2 126 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 C10orf55Q5SWW7 151 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 M0QZ24 198 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 RPL7P18124 248 aaKnown RBP11.45□□□□□ -0.58
CNOT3-210ENST00000618939 ZNF474Q6S9Z5 364 aaPredicted RBP11.45□□□□□ -0.58
CNOT3-210ENST00000618939 UNQ5815/PRO19632Q6UWF5 114 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 RNASE6Q93091 150 aaKnown RBP11.45□□□□□ -0.58
CNOT3-210ENST00000618939 GTF3C1Q12789 2109 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms