RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 H7C2G1 150 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 MFSD11O43934 449 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 PIAS1O75925 651 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 ATG12O94817 140 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 C1QAP02745 245 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 PPIBP23284 216 aaKnown RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 G6PCP35575 357 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 HINT1P49773 126 aaPredicted RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 AQP4P55087 323 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 NCALDP61601 193 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 POU6F1Q14863 301 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 ZNF638Q14966 1978 aaKnown RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 RHEBQ15382 184 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 KIF24Q5T7B8 1368 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 FAM27BQ5VT28 67 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 TRIQKQ629K1 86 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 LRRC28Q86X40 367 aaPredicted RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 RPP25LQ8N5L8 163 aaKnown RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 FAM172AQ8WUF8 416 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 WDR90Q96KV7 1748 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 TRABDQ9H4I3 376 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 PARVBQ9HBI1 364 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 ZNF532Q9HCE3 1301 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 TVP23BQ9NYZ1 205 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 PRNDQ9UKY0 176 aa1.02□□□□□ -2.25
TARDBP-220ENST00000618606 AMMECR1Q9Y4X0 333 aaPredicted RBP1.02□□□□□ -2.25
TARDBP-220ENST00000618606 SLIT2O94813 1529 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 DENND4BO75064 1496 aaPredicted RBP1.01□□□□□ -2.25
TARDBP-220ENST00000618606 NEO1Q92859 1461 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 MIA2Q96PC5 1412 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 A0A0D9SEW6 157 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 IRGMA1A4Y4 181 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 H0YJX3 145 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 SLC22A1O15245 554 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 PGLYRP1O75594 196 aaPredicted RBP1.01□□□□□ -2.25
TARDBP-220ENST00000618606 SHBGP04278 402 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 PIGPP57054 158 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 ZNF90Q03938 601 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 RELAQ04206 551 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 SLC38A11Q08AI6 406 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 SNCBQ16143 134 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 TPRXLQ17RH7 258 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 LINC01554Q52M75 96 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 SPANXN3Q5MJ09 141 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 LCA10Q71F78 164 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 DYNAPQ8N1N2 210 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 OR13C6PQ8NH95 151 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 STAG3L4Q8TBR4 150 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 WFDC5Q8TCV5 224 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 Q9BRP9 147 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 GINS3Q9BRX5 216 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 CHST6Q9GZX3 395 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 PCBD2Q9H0N5 130 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 PRO2289Q9P1D8 64 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 PYCARDQ9ULZ3 195 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 ERGIC3Q9Y282 383 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 V9GYQ6 96 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 ATG2BQ96BY7 2078 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 MAST2Q6P0Q8 1798 aa1.01□□□□□ -2.25
TARDBP-220ENST00000618606 TRPM6Q9BX84 2022 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 IGHV3-64A0A075B6Q5 118 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 ZNF860A6NHJ4 632 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 ZNF705FA8MVS1 300 aaPredicted RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 G3V2T6 193 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 J3QQQ9 107 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 CST8O60676 142 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 BANF1O75531 89 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 IFNA10P01566 189 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 MSMBP08118 114 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 TRGC1P0CF51 173 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 CRYGAP11844 174 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 PSMB8P28062 276 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 GLRXP35754 106 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 RPL26P61254 145 aaKnown RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 HIST1H4AP62805 103 aaKnown RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 ERHP84090 104 aaKnown RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 DR1Q01658 176 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 PABPC1L2AQ5JQF8 200 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 C3orf33Q6P1S2 294 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 LCN15Q6UWW0 184 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 MIR17HGQ75NE6 70 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 PFN4Q8NHR9 129 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 SPACA4Q8TDM5 124 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 DCANP1Q8TF63 244 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 TMEM106AQ96A25 262 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 GPR146Q96CH1 333 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 MRPS24Q96EL2 167 aaKnown RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 ADAT3Q96EY9 351 aaPredicted RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 SCGB3A1Q96QR1 104 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 TIMM21Q9BVV7 248 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 TTTY12Q9BZ98 90 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 SLC39A9Q9NUM3 307 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 NDUFB11Q9NX14 153 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 RPL26L1Q9UNX3 145 aaKnown RBP1□□□□□ -2.25
TARDBP-220ENST00000618606 DOCK5Q9H7D0 1870 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 SORL1Q92673 2214 aa1□□□□□ -2.25
TARDBP-220ENST00000618606 NYNRINQ9P2P1 1898 aaKnown RBP0.99□□□□□ -2.25
TARDBP-220ENST00000618606 SLX4Q8IY92 1834 aa0.99□□□□□ -2.25
TARDBP-220ENST00000618606 TRBV19A0A075B6N1 114 aa0.99□□□□□ -2.25
TARDBP-220ENST00000618606 TRGV4A0A0C4DH28 118 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms