RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ZNF114Q8NC26 417 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 RITA1Q96K30 269 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 M0QZK8 103 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 DEFA4P12838 97 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 CNTFRP26992 372 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 FXYD3Q14802 87 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 Q6ZRG5 221 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 Q8N6K4 173 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 CITED4Q96RK1 184 aa13.39□□□□□ -0.27
TRAPPC3-210ENST00000617904 RAB19A4D1S5 217 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 MYOD1P15172 320 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 ACOT6Q3I5F7 207 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 UQCC3Q6UW78 93 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 C16orf82Q7Z2V1 217 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 CENPVQ7Z7K6 275 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 OR10W1Q8NGF6 305 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 TMEM68Q96MH6 324 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 SH3BGRL3Q9H299 93 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 THYN1Q9P016 225 aa13.38□□□□□ -0.27
TRAPPC3-210ENST00000617904 OPRK1P41145 380 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 RUNX1Q01196 453 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 CD69Q07108 199 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 PJVKQ0ZLH3 352 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 KRTAP24-1Q3LI83 254 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 TMEM41BQ5BJD5 291 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 DYNAPQ8N1N2 210 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 PCNPQ8WW12 178 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 SSMEM1Q8WWF3 244 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 RBMXL1Q96E39 390 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 PBDC1Q9BVG4 233 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 HRH4Q9H3N8 390 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
TRAPPC3-210ENST00000617904 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 H2AFB1P0C5Y9 115 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 CD24P25063 80 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 WT1-ASQ06250 92 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 P2RX4Q99571 388 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 RSG1Q9BU20 258 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
TRAPPC3-210ENST00000617904 IGHV3OR16-10A0A075B7F0 116 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 IGLC7A0M8Q6 106 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 MT-CO2P00403 227 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 FABP1P07148 127 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 EIF4E3Q8N5X7 224 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 SSX3Q99909 188 aa13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 ACTR3CQ9C0K3 210 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC3-210ENST00000617904 A0A0U1RQK1 487 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 PRSS46E5RG02 174 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 IGHV4-38-2P0DP08 117 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 HIST1H1BP16401 226 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 CX3CL1P78423 397 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 IL17RELQ6ZVW7 336 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 MISP3Q96FF7 219 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
TRAPPC3-210ENST00000617904 SVEP1Q4LDE5 3571 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 A0A1W2PPV4 95 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 IFNA1P01562 189 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 SRD5A1P18405 259 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 M6PRP20645 277 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 SELENOTP62341 195 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 MRGPRG-AS1Q2M3A8 158 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 FAM120AOSQ5T036 256 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 Q8N9W7 124 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 C17orf50Q8WW18 174 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
TRAPPC3-210ENST00000617904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■■■■□ 20.6
TRAPPC3-210ENST00000617904 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 TEX22C9J3V5 150 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 KRBOX1C9JBD0 128 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 FCN1O00602 326 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 MDKP21741 143 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 RPL29P47914 159 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 SRSF2Q01130 221 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 SCGB2A2Q13296 93 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 PEA15Q15121 130 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms