RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 KBTBD11-OT1A0A1B0GTJ5 212 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 A0A1W2PRS3 328 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 PYYP10082 97 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 HOXD3P31249 432 aaPredicted RBP5.05□□□□□ -1.6
RFX3-212ENST00000617270 GLRXP35754 106 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 FABP5P3A8MUU1 101 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 CDKN1AP38936 164 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 LIMS1P48059 325 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 RNF125Q96EQ8 232 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 CITED1Q99966 193 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 ESPL1Q14674 2120 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 SRP19P09132 144 aaKnown RBP5.05□□□□□ -1.6
RFX3-212ENST00000617270 ERVK11-1P61568 191 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 TCRBV4S1A1TA0A5B7 111 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 SAP30O75446 220 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 IGHV3-53P01767 116 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 APOBEC3AP31941 199 aaPredicted RBP5.05□□□□□ -1.6
RFX3-212ENST00000617270 FXYD7P58549 80 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 SPRED2Q7Z698 418 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 RGPD8O14715 1765 aaPredicted RBP5.05□□□□□ -1.6
RFX3-212ENST00000617270 PLAC1Q9HBJ0 212 aa5.05□□□□□ -1.6
RFX3-212ENST00000617270 MRPS18AQ9NVS2 196 aaKnown RBP5.05□□□□□ -1.6
RFX3-212ENST00000617270 SLX4Q8IY92 1834 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 SAA2-SAA4A0A096LPE2 208 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 A8MXK9 166 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 NBR2O15453 112 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 C1QAP02745 245 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 SAA2P0DJI9 122 aaPredicted RBP5.04□□□□□ -1.6
RFX3-212ENST00000617270 HSD52Q0P140 79 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 SLC50A1Q9BRV3 221 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 CEP250Q9BV73 2442 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 DEFB121Q5J5C9 76 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 NRN1LQ496H8 165 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 C1QL4Q86Z23 238 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 ZNF114Q8NC26 417 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 GTSF1LQ9H1H1 148 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 TRGV1A0A0A0MS02 117 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 FAM27E3Q08E93 113 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 ZIC4Q8N9L1 334 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 TNFRSF14Q92956 283 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 ABHD17AQ96GS6 310 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 ZNF646O15015 1829 aaPredicted RBP5.04□□□□□ -1.6
RFX3-212ENST00000617270 LAGE3Q14657 143 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 SLC22A18ASQ8N1D0 253 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 NDUFAF3Q9BU61 184 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 ABCA1O95477 2261 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
RFX3-212ENST00000617270 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 UMODP07911 640 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 COX6A1P12074 109 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 PIN1P1O15428 100 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 RHOGP84095 191 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 IFI27L1Q96BM0 104 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 PRADC1Q9BSG0 188 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 CFHR5Q9BXR6 569 aa5.04□□□□□ -1.6
RFX3-212ENST00000617270 LEPROTO15243 131 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 CECR9P0C854 216 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 CARHSP1Q9Y2V2 147 aaKnown RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 TRAV9-1A0A075B6T8 112 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 CD160O95971 181 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 IGKV1-8A0A0C4DH67 115 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 DUSP14O95147 198 aaKnown RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 UCP3P55916 312 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 Q6ZT83 130 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 LINC00527Q9UJ94 153 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 DDX60Q8IY21 1712 aaKnown RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 GZMMP51124 257 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 TPTE2P1Q5T6R2 138 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 ZNF474Q6S9Z5 364 aaPredicted RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 TEX43Q6ZNM6 134 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 WFDC6Q9BQY6 131 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 NUP98P52948 1817 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 HOXB1P14653 301 aaPredicted RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 RPL23P62829 140 aaKnown RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 PLSCR4Q9NRQ2 329 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 A0A1W2PQF6 199 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 CELA3AP09093 270 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 C8orf82Q6P1X6 216 aaPredicted RBP5.03□□□□□ -1.6
RFX3-212ENST00000617270 TMEM170AQ8WVE7 144 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 SCRT1Q9BWW7 348 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 DEPPQ9NTK1 212 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 TMEM14DPA8MWL7 114 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 SIGLEC15Q6ZMC9 328 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 SMRP1Q8NCR6 262 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 RCHY1Q96PM5 261 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 KLF12Q9Y4X4 402 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
RFX3-212ENST00000617270 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 CLPSL1A2RUU4 121 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 COX5BP10606 129 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 IFITM2Q01629 132 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 C1QL2Q7Z5L3 287 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 BCL6BQ8N143 479 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms