RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 C15orf32Q32M92 178 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 FAM223AQ8IWN6 122 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 PAIP2BQ9ULR5 123 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 S4R3C0 116 aa12.12□□□□□ -0.47
PCDHGC3-204ENST00000617222 L7N2F9 121 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 LY86O95711 162 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 TMEM50AO95807 157 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 PAX9P55771 341 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 VAMP2P63027 116 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 NOXA1Q86UR1 476 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 SMIM8Q96KF7 97 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
PCDHGC3-204ENST00000617222 MFSD2BA6NFX1 497 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 C15orf62A8K5M9 175 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 H3BP45 60 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 MT-CO2P00403 227 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 RPP30P78346 268 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 ZNF436Q9C0F3 470 aaPredicted RBP12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-204ENST00000617222 I3L2K1 104 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 K7EIM0 57 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 RLN2P04090 185 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 IFNA4P05014 189 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 LGALS1P09382 135 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 RAB11AP62491 216 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 EXOSC2Q13868 293 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 MLANAQ16655 118 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 C8orf86Q6ZUL3 223 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 SPATA3Q8NHX4 192 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 VN1R17PQ8TDU5 208 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 SCARB1Q8WTV0 552 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 EEF1AKMT3Q96AZ1 226 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 C11orf1Q9H5F2 150 aa12.09□□□□□ -0.47
PCDHGC3-204ENST00000617222 ANKRD34BA5PLL1 514 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 H0YIZ8 118 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 I3L521 148 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 CORTO00230 105 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 BCAP31P51572 246 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 TAS2R30P59541 319 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 ZNF343Q6P1L6 599 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 RNASEH2CQ8TDP1 164 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
PCDHGC3-204ENST00000617222 STAB1Q9NY15 2570 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 TSC22D2O75157 780 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 DEDDO75618 318 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 MPC2O95563 127 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 GIPP09681 153 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 OPRK1P41145 380 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 RUNX1Q01196 453 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 CLEC19AQ6UXS0 136 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 ZNF502Q8TBZ5 544 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 DUX3Q96PT4 197 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 RNF126Q9BV68 326 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 FNDC4Q9H6D8 234 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 TENM1Q9UKZ4 2725 aa12.07□□□□□ -0.48
PCDHGC3-204ENST00000617222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 TRBV7-1A0A0A6YYK4 115 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 FAM24AA6NFZ4 105 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 TRBV12-3P01733 135 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 CAV2P51636 162 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 TMEM14EPQ6UXP3 125 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR11H1Q8NG94 326 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR1N2Q8NGR9 330 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 CCDC140Q96MF4 163 aa12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
PCDHGC3-204ENST00000617222 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 E5RGE8 158 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 M0QZ24 198 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 CCL24O00175 119 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 CCNKO75909 580 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 HSPB1P04792 205 aaKnown RBP12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 CLEC3BP05452 202 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 MFAP4P55083 255 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 RAP2BP61225 183 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 Q56UQ5 140 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms